Ochotona princeps (American pika): 101536212
Help
Entry
101536212 CDS
T07609
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101536212 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
opi01009
]
101536212 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101536212 (PCDH11X)
Protein phosphatases and associated proteins [BR:
opi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101536212 (PCDH11X)
Cell adhesion molecules [BR:
opi04515
]
Cadherins
Protocadherins
101536212 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Drf_FH1
DUF6377
Motif
Other DBs
NCBI-GeneID:
101536212
NCBI-ProteinID:
XP_004596367
LinkDB
All DBs
Position
X
Genome browser
AA seq
1350 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPDKSLTSP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIMLDARCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAVDPDIGINGVQNYQLIK
GQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLF
HLNTTTGLITVKEPLDREEAPSHKLLVLATDGGSMPARAMVLVNVTDINDNIPSIDIRYI
INPTNGTVVLSENAPLNTKVALITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFISISVPENNS
PGTQLTKISATDADSGRNAEISYLLGIDAPSEFNLDHRTGILTAVKKLDREKQEKYYFTV
LAKDNGIPSLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVTLSIVEVNDEFTIDPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVT
INVVDVNDNKPVFIVPPSNYSYELVLPSTSPGTVVFQVVAIDNDTGMNAEIRYSIVGGNA
NGLFMIEQTSGNITLKEKCIVADLGLHRLVVKAKDLGQPDSLFNVVVVNLFINESVTNAT
LINELVHKSIETPVTQNVETTDASSPTSDYVKIMVAIVAGTITVVLVIFITAVVRCRQSP
HLKAAQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKNAPKNLLLNFVTIEEAKADDADND
GNSVTLDLPIELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSK
HHIIQELPLDNTFVACDSISKCSSSSSDPYSVSECSYPVTTFKAPVSVHVRPTMKEVVRS
HTPIKESTTVEIWTHPQPQRKSEGKKAGKAQRRVTFHLPEGSQESSSDGGLGDHDAGSLP
STSHALPLGYPQEEYFDHAAPNNRTEGDGNSDPESTFIPGLKKAAEITVQPTVEEASDNC
THECLILGHSDACWMPASLTHSSPSQGQASALCRSPPLTQSTLRRRSPPVTQTIALCHSP
PTTQAIALCHSPPPVQASALHHSPPLAQTTALCHSPPPAQGSALRYSPPLAQAVGVRRSP
PLPQAATLHRNQAQAPIAMQQGWVQGAATDGLRTLDQSGQSSTRAQFYTMSDRIHHSDDS
IKVIPLTTFTPGQQARPSRGDSPVMEEHPL
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgcgtcgtgtttcag
tctggcgcccaggagaagaactacacggtccgagaagaaatgccagaaaacgtcctgata
ggcgacttgttgaaagacctcaacttgtcgctgattccagacaagtccttgacatcgcca
atgcagttcaagctagtctataagacaggagatgtgccactgattcggatagaagaaggg
actggagagatcttcactaccggagctcgcattgatcgtgagaaattatgtgctggtatc
atgctggatgcccgttgcttttatgaagtggaagttgccgttttgccggatgaaatattt
agactggttaagatacgttttctgatagaggacataaatgataatgcaccattattccct
gcaacggtcatcaacatatcaattccagaaaattcggctataaattccagatatgctctc
ccagcggcagttgatcctgacatcggaataaatggagttcaaaactaccaactaatcaag
ggtcaaaatatttttgggcttgatgtcattgaaacaccggaaggagacaagatgccacaa
ctgattgttcaaaaggagctagatagggaagagaaagatacctatgtgatgaaagtaaag
gttgaagatggtggcttccctcaaagatccagtactgccatcttgcaagtaagtgttgct
gatacaaatgacaaccgcccagtctttaaggaaaatgagattgaagtcagtataccagaa
aatgcgcccgtgggcacttcagtgacacagctccatgctacagatgctgacataggggaa
aacgccaagattcatttctatttcagcaatctagtctccaacattgccaaaagactgttt
cacctcaacaccaccactgggcttatcacagtcaaagaaccactggatagggaagaggca
ccaagccacaagttactggttttggcaaccgatggtggatcaatgcctgcaagagccatg
gtgctggtaaatgttacagatatcaatgataacatcccatccattgatataaggtacatc
atcaatccaaccaatggcaccgtggttctttcagaaaatgccccactcaacaccaaagtt
gctctcataactgtgactgataaggatgctgaccataatggtagggtgacgtgcttcaca
gatcatgaagtccctttccgtttaaggccagtatttagtaatcaattcctcctggagaca
gctgcgtatctcgactatgagtccaccagagaatatgccattaaattgctggctgcagat
gctggcaagcctcctttgaatcagtcatccatgctcctcatcaaagtgaaagatgaaaat
gacaatgctccagttttcacgcagcctttcataagtatttccgttcctgagaataactct
cctggcactcagctgacaaaaataagcgccacggatgcagacagtgggcggaatgctgag
atcagttacctgctgggtattgatgctccatccgaattcaatctggatcatcgtacaggg
attctgaccgcagtgaagaaactagacagagaaaagcaggaaaaatattacttcacagtt
ctggcaaaagataatggaataccatccttaataactaatgccaccgtcttagtgactgtt
cttgatcagaatgataacagcccaattttcacgcacaatgagtacaacttctatgtccca
gaaaaccttccaagacatggcacagtgggactcatcacggtaactgatcctgactatgga
gagaattctgcggtcactctctccattgtcgaagtgaatgacgagtttaccattgatcca
cagactggtgtcatccgaccaaatatttcatttgatcgagaaaaacaagaatcttatact
ttttatgtaaaggctgaggatggtggtagagtatcgcgctcttcaactgccaaagtaacc
attaatgtggttgatgtcaatgacaataaacctgtttttattgttcctccttccaactac
tcctatgaattggttctaccatccactagtccaggcacagtggtcttccaggtagttgcc
attgacaatgatactggtatgaatgcagaaatccgttacagcattgtaggggggaatgcc
aatggtctttttatgattgagcaaacatcaggaaacatcacactgaaagagaaatgtatt
gttgcagaccttggtttgcacagattggtagtaaaagctaaggacttaggacaacctgat
tccctcttcaatgttgtcgttgtcaatctcttcatcaatgaatcagtgaccaatgctaca
ctgattaatgaattagtgcacaaaagcattgaaacgccagtgacacaaaatgttgagacg
actgatgcatcctcaccaaccagtgactatgtcaagatcatggttgccattgttgctggc
accataactgtcgtcctagtgattttcatcactgctgttgtgagatgtcgccaatcacca
catcttaaggctgctcagaaaaacaaacagaattccgaatgggttactccaaacccggaa
aacagacagatgataatgatgaagaaaaagaagaagaagaagaagaagaatgcccctaag
aacttgcttcttaactttgtcactattgaagaagcaaaggcagatgatgctgataatgat
ggaaacagtgtcacacttgaccttcctattgagctggaggagcaaaccatgggcaagtac
aactggggcacaacacctactacattcaagcctgatagtcctgatctggcccgacactac
aagtctgcctctccacagccagcttttcagatccagcctgaaactcccctgaattctaag
catcacatcattcaggaactgcctcttgataacacgtttgtggcctgcgattccatctcc
aagtgttcctccagcagctctgatccctacagtgtgtctgaatgcagttatccagtgaca
accttcaaggcccctgtgtctgtgcacgtcagaccgacaatgaaggaggtggtacgatct
cacacccccatcaaagagtcaaccactgtggagatctggactcatcctcaaccacagcgg
aaatccgaggggaaaaaggcaggaaaggctcagcggcgtgtcacatttcacctaccagaa
ggctctcaggaaagcagtagtgatggtggactgggagaccatgacgcaggcagcctaccc
agcacgtcccatgctctaccccttggctatcctcaggaggaatactttgatcatgctgca
cccaacaaccgcactgaaggggatggcaactctgatcctgaatctactttcattcctgga
ctaaagaaagctgcagaaataactgttcaaccaactgtggaagaggcctctgataactgt
acccacgaatgtctcatcttgggccactctgatgcctgctggatgccagcttctctgacg
cattccagtccatcacagggacaggcctctgcactctgccgcagcccacccctgacacag
tccactcttcgtcgccgcagtcctccggtgacacagaccatcgctctctgccacagccct
ccaacgacccaggctatcgcactgtgccacagccctccaccagtgcaggcatctgctctc
caccacagtcctcctctagcacagaccactgcactttgtcacagtccaccaccggcacag
ggttcagccctgcgctatagccctcccctggcacaagctgttggggtccgccgcagccct
cctctgccacaggctgctaccttgcatcgcaaccaggcccaagcaccaatagctatgcag
cagggctgggtgcagggggcggcaactgatggattgcgtactcttgatcagagtgggcaa
agtagtacaagagctcagttttacaccatgtccgatagaatccatcacagcgatgattca
atcaaggtcattcccttgacaaccttcacgccaggtcaacaagccagaccttctaggggt
gattccccggtgatggaagagcatccattataa
DBGET
integrated database retrieval system
