Ochotona princeps (American pika): 101536311
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Entry
101536311 CDS
T07609
Symbol
WDR1
Name
(RefSeq) WD repeat-containing protein 1 isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101536311 (WDR1)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
101536311 (WDR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_HPS5
eIF2A
PEP5_VPS11_N
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_EIPR1
Ge1_WD40
NBCH_WD40
Beta-prop_RIG_1st
RMC1_N
WD_LRWD1
WD40_like
WDR54
WD40_RFWD3
PROPPIN
Beta-prop_DCAF12
KNTC1_N
Beta-prop_ELP1_2nd
PQQ
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
101536311
NCBI-ProteinID:
XP_004579270
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All DBs
Position
2A:complement(1617778..1656890)
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AA seq
606 aa
AA seq
DB search
MPYEIKKVFASLPQVERGVSKILGGDPKGNNFLYTNGKCVILRNIDNPAIADIYTEHAHQ
VVVAKYAPSGFYIASGDVSGKLRIWDTTQKDHLLKYEYQPFAGKIKDVAWTEDSKRIAVV
GEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFK
FKFTIGDHGRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGDGKAHDGGIYAV
SWSPDSTHLLSASGDKTSKIWDVNVNSVVTTFPMGSNVLDQQLGCLWQKDHLLSVSLSGY
INYLDKNNPNKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFA
GKGHTNQVSRMTVDESGQLVSCSMDDTVRYTNLMLRDYSGQGVVKLDVQPKCVAVGPGGY
AVVVCIGQVVLLKDQKKCFSLNNLDYEPEVVAVHPSGDAVAVGGADGNVRVYSILGTTLK
DEGKLLEAKGPVTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHHAKIVCLAW
SPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVK
EWTITY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgagatcaagaaggtgttcgccagcctcccccaggtggagcggggcgtctcc
aaaatcctgggaggcgaccccaagggcaacaattttctgtacaccaacggcaagtgcgtc
atcctgaggaacatcgacaacccagccattgctgacatctacacggagcacgcccatcag
gtggtggtggccaagtacgcgcccagcggattctacatcgcttctggagatgtgtctggg
aagctgaggatctgggataccacgcagaaggatcacctcttgaagtatgagtaccagcct
ttcgctgggaagatcaaggatgttgcttggaccgaagatagtaagaggatcgccgtggtg
ggcgaaggaagagagaagttcggagccgtcttcctgtgggacagcggctcttccgtgggc
gagatcacaggacacaacaaagtcatcaacagtgtggacatcaagcagagcaggccgtac
aggctggcaacagggagcgacgataactgtgccgccttctttgagggacccccgttcaag
ttcaagtttacaattggtgaccatggtcgctttgtcaactgtgtgcggttctctcctgac
gggaacagatttgccacagccagtgccgatggccagatctacatctatgatgggaagaca
ggagagaaagtgtgtgctctgggagacggcaaggcccacgacggaggaatttacgctgtt
agttggagtccggatagcactcacttgctttctgcttccggagacaaaacctccaagatt
tgggatgtcaacgtgaattctgtggtcaccacatttcccatgggctctaacgtcctggat
cagcagctgggctgcttgtggcagaaggaccacctcctcagtgtctccctctcgggctac
atcaactacctggacaagaacaaccccaacaagcccctgcgtgtgatcaagggtcacagt
aaatcgatccagtgtctgacagtgcataaaaacggcggcaagtcctacatctactcgggg
agtcacgacgggcacattaattactgggattcagagactggggagaatgactcctttgct
gggaaaggccacacgaatcaggtgtccaggatgaccgtggatgagtctgggcagctcgtc
agctgcagcatggacgacacggtgcggtacaccaacctcatgctgcgagactacagcggc
caaggagttgtgaaactggatgtccagccaaagtgtgtagctgttggccctgggggctat
gctgtggtcgtgtgcatcgggcaggtggtgctcctgaaggaccagaagaagtgcttcagc
ctcaacaaccttgactacgagcccgaggtcgtggcggtgcaccccagcggcgatgcggtg
gctgttgggggcgcggacggcaatgtccgtgtgtacagcatcctgggcaccacgctgaag
gacgagggcaagctcctggaggccaagggccctgtgacggatgtggcctactcccacgat
ggcgccttccttgctgtgtgtgatgccagcaaggtcgtcacggtgtttagcgtggctgat
ggctactcggagaacaatgttttctatgggcaccacgcaaaaatcgtctgcctggcctgg
tcaccagacaacgagcactttgcctctgggggcatggacatgatggtttatgtctggacc
ctgagtgacccggagaccagagtcaagatccaagatgcacaccggctacaccatgtcagc
agcctggcctggctggacgagcacaccctggtcacgacgtcacacgacgcctctgtcaag
gagtggacaatcacctactga
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