Ochotona princeps (American pika): 101536334 Help Entry 101536334         CDS       T07609                                  Symbol RAD50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism opi  Ochotona princeps (American pika) Pathway opi03440   Homologous recombination opi03450   Non-homologous end-joining opi04218   Cellular senescence Brite KEGG Orthology (KO) [BR:opi00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     101536334 (RAD50)    03450 Non-homologous end-joining     101536334 (RAD50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     101536334 (RAD50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:opi03032]     101536334 (RAD50)    03400 DNA repair and recombination proteins [BR:opi03400]     101536334 (RAD50) DNA replication proteins [BR:opi03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     101536334 (RAD50) DNA repair and recombination proteins [BR:opi03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      101536334 (RAD50)     BRCA1-C complex      101536334 (RAD50)    NHEJ (non-homologous end-joining)     MRX complex      101536334 (RAD50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N AAA_15 DUF7491 AAA_29 DUF2703 AAA_16 Motif Other DBs NCBI-GeneID:  101536334 NCBI-ProteinID:  XP_004586675 LinkDB All DBs Position 3A:complement(38071829..38126859) Genome browser AA seq 1237 aa AA seqDB search MSRIEKMSILGVRSFGIEDKDKQIISFFTPLTILVGPNGAGKTTIIECLKYICTGDFPPG TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCSQKSKKTEFKTLEGVITR TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITTKEAQLTSSKEI VKSYENELEPLKNRLKEIENNLSKIMRLDNEIKALESRKKQMQKDNSELEQKMEKVFQGT DDQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH QEQIRARDSLLQSLAAQLELDGFERGPFNERQIKNFHKLVRERQEKEAETANQLMNDFAE KETLKQKQIDEIRDKKTGLGRIIELKSEILNKKQSELKNVKFELQQLEGSSDRILELEQE LKKAERELSKAEKNSNVETLKTEVISLQNEKTDLDRSLRKLDQEMEQLNHHTTTRTQMEM LNKDKVDKDEQIRKIKSRHSDELISLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEDIEKSSKQRAMLA GATAVYSQFITQLTDDNQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK KKEKRRDEMLGLVPMRQSIVDLKEKEVPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP EEESAKVCLTDVTIMERLQMELKDVERKLAQQAAKLQGIDLDRTVRQVNQEKQEKQHKLD TVTSKIELNRKLIQDQQEQIQHLKSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS LFREIKDAKEQVNPLETTLEKFQQEKEELVSKKHISNKIAQDKLNDIKEKVKNIHGYMKD IENYIQDGKDDYKKQKEAELNKVIDQLSECEKHKEKINKDMGIMRQDIDTQKIQERWLQD NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKKAIMKFHSMKMEEINKIIRDLWRSTY RGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRL ALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVE LLGRSEYVEKFYRIKKNIDQCSEIVKCSVNSLGSYVH NT seq 3714 nt NT seq  +upstreamnt  +downstreamnt atgtcccgcatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggataaa gataagcaaattatcagtttcttcaccccgctcacgattttggttggccccaatggggcg gggaagacgactatcattgaatgtctgaaatatatttgtactggagacttccctcctgga accaaaggaaatacgtttgttcatgatcccaaggttgctcaagaaacagatgtgagagcc caaatccgcctgcagtttcgggatgtcaacggagagcttgttgctgtgcagagatccatg gtgtgttctcaaaagagcaagaagacggagttcaaaaccctggaaggagtcattaccagg accaagcatggtgagaaggtgagtctgagctctaagtgtgcagagatcgatcgagaaatg ataagttctcttggcgtttccaagtctgtgttgaacaatgtcattttctgtcatcaagaa gactctaattggcccttaagtgaaggaaaggctctcaagcaaaaattcgatgagattttt tctgcaacaagatacattaaagccttagaaacgcttcgtcaggttcgtcagacacaaggt cagaaagtgaaggaatgtcaaactgaactaaaatacctgaagcaaaataaggaaaaagcc tgtgaaatccgtgatcagattactactaaggaagcccagctgacatcttcaaaggaaatt gtcaaatcctatgagaatgaactggaaccactgaagaaccgtctgaaagaaattgaaaac aatctctccaaaataatgagacttgacaatgaaattaaagccttggagagccgaaagaag caaatgcagaaggataacagtgaactggaacagaaaatggaaaaggtttttcaagggact gatgaccagctaaatgacttgtatcacaatcaccagagaacagttagagaaaaagaaagg agattagtagattgtcagcgtgaactagagaaattaaataaagagtctagacttctcaat caagaaaaatcagaactccttgttgaacagggtcgtcttcagctacaggcagatcgccat caggaacagatccgagctagagactcattacttcagtccttggcagcacagctggaattg gatggctttgaacgtggacccttcaatgaaagacaaattaaaaattttcacaaacttgtg agagagagacaagaaaaggaagcagagactgccaaccagctgatgaatgactttgcagaa aaagagactctgaaacagaaacaaatagatgagataagagataaaaaaactggattggga agaataattgaactaaaatcagaaatcctaaataagaagcagagtgaactgaagaatgtg aagtttgaattacagcagttggaaggatcttcagacaggattcttgaactggaacaggag ctcaaaaaagctgaacgtgaattaagcaaggctgagaaaaacagtaatgttgaaacccta aaaacagaggtaataagtcttcaaaatgagaaaacagacctagacaggagcctgcgtaaa ctggaccaggaaatggagcagttaaatcatcatacgaccacacgtacccaaatggagatg ctgaacaaagacaaagttgacaaagatgaacaaattagaaaaataaaatctaggcatagt gatgaattaatttcactgttggggtattttcccaacaaaaaacagcttgaggactggctt catagtaaatcaaaagaaattaatcagaccagagacagacttgccaaattgaacaaggag ctagcttcggctgagcaaaataaaaatcatatcaacaatgagctaaaaagaaaggaagag caactgtcaagttatgaagacaagctttttgatgtttgtggaagccaagattttgagagt gatttagataggcttaaagaggacattgaaaaatcctcaaaacagcgagctatgcttgct ggggccacagctgtttactcccagttcattactcagctgacagatgacaaccagtcgtgt tgtcccgtctgtcagagagtttttcagacagaggctgaattacaagaagtcatcagtgat ttgcaatccaaactgcggcttgctccagataaactcaagtcaacagaatcagagctaaag aagaaagaaaagcggcgagatgaaatgctgggacttgtgcccatgaggcaaagcatagta gatttgaaggagaaggaagtaccagaattaagaaataaactacagaatgtcaatagagat atacaacgcctaaagaatgacatagaagaacaggaaactctcttgggtacaataatgcct gaagaagaaagtgctaaagtatgtctgacagatgttacaattatggagagactccagatg gaacttaaagatgttgaaagaaaactcgcacagcaagcagctaagctacaaggaatagac ttagatcgaactgttcggcaggtgaaccaggaaaaacaagagaaacagcacaaattagat acagtgaccagtaagattgaattgaatcggaagctcattcaggaccagcaagaacagata caacacctaaaaagtataacaaatgagcttaaatcagagaaacttcagatatccactaat ctgcagcgtcgtcagcagctggaagagcagactgtggaattgtccactgaagttcagtct ttgttcagagagataaaggatgctaaggagcaggtaaaccctttggaaacaacattggag aaattccagcaggaaaaagaagaattagttagcaaaaaacacataagcaacaaaatagca caggataaactgaatgacatcaaagagaaggttaagaatattcatggttatatgaaagac attgagaattacattcaggacgggaaagatgactataagaagcaaaaagaagctgaactt aataaggttatagatcaactaagtgaatgtgagaaacacaaagaaaagataaataaagac atgggaattatgagacaagatattgacacacagaagatacaggaacgttggctacaggac aatcttactttaagaaaaagaaacgaggaactaaaagaagttgaagaagaaagaaagcaa catctgaaggaaatgggacaaatgcaggttttacaaatgaagaaagcaataatgaaattt cacagtatgaaaatggaggagatcaataagattattcgtgatctttggcgaagcacctac cgcggacaagatattgaatatatagaaattcggtctgatgctgatgaaaacgtctcagct tcggataaaaggcggaattacaattaccgtgtggtgatgctgaagggggacacagccttg gacatgcgtggacgatgcagtgctgggcagaaggtcttagcctcactcatcattcgcctg gccctggctgaaaccttctgccttaactgcggcattcttgctttggatgagcccacgaca aatctggaccgagagaacatcgagtctctcgcacatgcactggtggaaataataaaaagt cgttcacagcagcgaaacttccagcttctggttatcactcatgatgaagacttcgtggag cttctaggacgttctgaatatgtggagaaattctacaggatcaagaagaacattgatcag tgctcagagattgtcaagtgcagcgtgaactccctggggtcttacgttcattaa

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