Ochotona princeps (American pika): 101536510
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Entry
101536510 CDS
T07609
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101536510 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101536510 (ROBO1)
Cell adhesion molecules [BR:
opi04515
]
Immunoglobulin superfamily
ROBO family
101536510 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
101536510
NCBI-ProteinID:
XP_004588712
LinkDB
All DBs
Position
14:91408605..91945266
Genome browser
AA seq
1554 aa
AA seq
DB search
MVLGPWQGLVCRRRGEDEVCCVLSLCVLLSLVDLLVSGHAVIGIASTVTTVTPSAALVLF
PTDPEELERGKDHGTPTPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATL
NCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVC
VARNYLGEAVSHNASLEVALLRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKD
GFPLDDKDERITIRGGKLMITYTRKSDAGKYICVGTNMVGERESEVAELTVLERPSFVKR
PSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGS
YTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRRE
GSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTD
VIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLET
GVLQIRYAKGLTQSSWIVADVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYNILYRPSAAGHGDTEWSVFEVRTPAKNSVIIPDLKKGVNYEIKVRPFFN
EFQGADSEIKFAKTLEEAPSAPPQSVTISKNDGNGTAILVSWQPPPEDTQNGMVQEYKVW
CLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGN
PVPPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSSYAGIR
KVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCT
AGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVNPSGQPTPYATTQLIQSNLSNNMSNGSGDSGEKHWKPPGPQKQEVAPVQYNI
MEQNKLNKDYRANDAIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPK
QGGMNWADLLPPPPAHPPPHSNSEEYSVSVDESYDQEMPCPVPPARMYLQQDELEDDDER
GPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQTDRRRQPVS
PPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPAS
SVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLK
VARRQMQDATGRRHFPASQCPRPTSPVSTDSNMSAAVMPKARPAKKQKHQPGHLRREAYT
DDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGSSYRGREVLDG
RQVADMRTNPGDPREAQEQQNDGKGRGNKGAKRDFPPAKTHLIQEDILPYCRPTFPTSNN
PRDPSSSSSVSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgggaccttggcagggcttagtgtgccgcaggaggggcgaggatgaagtgtgc
tgtgtgttgtccctgtgtgttttgctgtcactcgtggatttgcttgtgtctggacatgct
gtgatcggaatcgcatctactgttaccactgtaaccccatcagcagctctggtgttgttt
ccgacagaccctgaagaactagagagggggaaagaccacgggacgccgacccccacctct
gataacgatgacaattcgctgggctacacaggctcccgtcttcgccaggaggattttcca
cctcgcattgttgaacacccttcagatctaatcgtctcaaaaggagaacctgcaactttg
aactgtaaagctgaaggccgccccacccccaccattgaatggtacaaaggaggggagaga
gtggagaccgacaaggatgaccctcgctcacaccgaatgttgctgcctagtggatcttta
tttttcttacgcatagtacatggacggaaaagtaggcctgacgaaggtgtctacgtctgt
gtagcaaggaattaccttggagaagctgtgagtcacaatgcgtcgctggaggtagcttta
ctacgggatgacttcagacaaaacccttctgatgtcatggtagcagtaggagagcccgcg
gtcatggaatgccagcctccgagaggccatcctgagcctacgatctcatggaagaaagat
ggctttcccctggatgacaaggatgaaagaataactatacgaggaggaaagctcatgatt
acttacacccgtaagagcgatgctggcaaatacatctgtgtcgggaccaacatggttgga
gaacgtgaaagtgaagtagcagagctaactgtgttagagagaccgtcgtttgtgaagagg
cctagtaacttagccgttactgtggatgacagcgcagaatttaaatgtgaggcccgagga
gaccctgtgcctacagtacggtggaggaaagatgatggagagctgcccaaatccagatat
gaaattcgagatgatcataccttgaaaattcggaaggtgatggctggtgacatgggctca
tatacctgtgttgcagaaaatatggtgggaaaagcagaagcatctgccactctgacagtt
caagagcctccacattttgtggtgaaacctcgagaccaggttgttgcattgggacgaact
gtgactttccagtgtgaagcaaccggaaaccctcaaccagccattttttggaggcgagag
gggagtcagaatctgcttttctcataccaacctccacagtcctccagccggttctcagtc
tcccagactggtgaccttactattaccaatgttcagcgatctgatgttggatattacatc
tgccagactttaaatgttgccggaagtatcatcacaaaagcatatttggaagttactgat
gtgattgcagaccggcctcccccagtcattcgccaaggtcctgtgaatcagacggtggcc
gtggatgggaccttagtgctcagctgtgtggccacaggcagtccagtcccaacaattctg
tggaggaaggatggagtccttgtttccacccaagattctcgaatcaagcagctggagacg
ggagtgctacagatccgatatgcaaagggcctgacgcagtcttcttggattgttgcagat
gttcctccgacaagtcagggggtggaccacaagcaagtgcagagagaactggggaatgtt
gtcctgcacctccacaaccctaccatcctttcttcatcctccatcgaagtgcactggacg
gtggaccagcagtcgcagtacatccagggctataacatcctctaccggccttcagcagcc
ggccacggagacactgagtggtcagtgtttgaagtgaggacgccagccaaaaacagtgtc
attatccctgacctcaaaaagggtgtcaactacgaaattaaagtgcgccccttttttaat
gaatttcagggagcagatagtgaaatcaagtttgccaaaaccctggaagaagcacccagt
gccccgccacaaagcgtaaccatatcaaagaacgatgggaacggaactgcaattcttgtt
agttggcagccccctccagaagacacacagaacggaatggtccaagaatacaaggtttgg
tgcctcggcaatgaaactcggtatcatataaacaagacagtagatggttccactttttct
gtggtcattccctctctggtacctgggatccgatacagcgtggaagtggccgccagcacc
ggagctgggcctggggtgaagagcgagccccaattcatccaattggattctcacggcaac
cccgtgccgcccgaggaccaagtcagccttgcccagcagatctcggacgtggtgaagcag
ccggccttcatcgcaggcattggcgcagcctgttggatcatcctgatggtcttcagcatc
tggctctatcggcatcgcaagaagagaaatggactcaccagcagctacgcaggcatcagg
aaagtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggagaagctgtg
agcagcggagggaggccaggacttctgaacatcagtgagcctgccacacagccgtggctg
gctgacacgtggccaaacactggcaacaatcacaatgactgctccatcaactgctgcaca
gcaggcaacgggaacagcgacagcaacctgacaacatacagtcgcccagctgattgtata
gcaaattataacaaccaactggataacaaacaaacaaatctgatgctccctgagtcaact
gtttatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagccca
aatctgaaggatgggcgttttgtcaatccatcagggcagcccacaccttacgccaccacc
caactcatccagtcaaacctcagcaataacatgagcaatggcagtggggactccggcgag
aagcactggaaaccacctggtccgcagaagcaagaggtggcaccagttcagtataacatc
atggagcagaacaagctgaacaaagattatcgagcaaatgatgcaattcctccaactatc
ccctacaatcaatcatatgaccaaaatacaggaggatcctacaacagttcagaccggggc
agtagcacatctgggagtcaagggcacaagaagggggcacgaacacccaaggtaccaaaa
cagggtggcatgaactgggcagacctgcttccccctcccccagcacaccctcccccacac
agcaatagtgaagaatacagtgtttctgtcgatgaaagctatgaccaagagatgccatgc
cctgtaccaccagcaaggatgtatttgcaacaagatgaattagaagatgatgatgaaaga
ggccccacgccccctgtgcggggagcagcttcatctccagcagctgtgtcctatagccat
cagtccacggccactctgactccttcccctcaggaggagctccagccgatgttacaggac
tgcccggaggagattggccacttgcagcaccagacagacaggagacgacagcctgtgagt
ccacctcctccgccacggccgatttccccaccacacacctatggctacatttctggaccc
cttgtgtcagatatggatacggatgcgccggaagaggaagaggatgaagccgacatggaa
gtagccaagatgcaaaccagaaggcttctgttacgtggtctggagcagacgcctgcctcc
agtgttggggacctggagagctctgttactggctccatgatcaatggctggggctcagcc
tctgaggaggacaacatttccagcgggcgctccagcgtgagctcatccgatggctccttt
ttcacggatgctgattttgcccaagcggttgcagcagcagcagagtatgcaggtctgaaa
gtggcacgacgtcaaatgcaggatgcaactgggcgccgacacttccctgcctctcagtgt
cctcggcctacaagccctgtgtccactgacagcaacatgagtgctgctgtaatgccgaaa
gccagacccgccaagaaacaaaaacaccagccaggacatctgcgcagagaagcctacaca
gatgatcttccacctcctccagtgccaccacctgctataaaatcacccactgtccaatcc
aaggcccagctggaggtacgacctgtaatggtgccaaaactcccttctgtagaagcaaga
actgacagatcatcagatagaaaaggaagcagttacagagggagagaagtactggatgga
agacaagttgctgacatgcgaaccaatccaggggatcccagagaggcacaggagcagcag
aatgacgggaaaggacgaggaaacaagggagcaaaacgagactttccaccagcaaagact
catctcatccaagaggatattctgccatactgtagacctacatttccaacatcaaataat
cccagagatcccagttcctcaagctcagtgtcatcaagaggatcaggaagcagacaaaga
gaacaagcaaatgttggtcggagaaatattgcagaaatgcaagttcttggaggatacgaa
agaggagaagataataatgaagaattagaggaaactgaaagctga
DBGET
integrated database retrieval system