Ochotona princeps (American pika): 101536578
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Entry
101536578 CDS
T07609
Symbol
LTBP2
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101536578 (LTBP2)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
101536578 (LTBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
EGF_2
EGF_Teneurin
Plasmod_Pvs28
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
101536578
NCBI-ProteinID:
XP_036352139
LinkDB
All DBs
Position
20:19039971..19119687
Genome browser
AA seq
1811 aa
AA seq
DB search
MGSPATSSRPGGTCWNPRKGFLPQLILALLVAMGHAQRDPVGRYELAGRDAARLRRPGAS
HPAAAAAAKVYSLFREQDPPVPGLPPAERTQPGWGSPRRLAEAEARRPYRAQNSLRRIQP
PAQNRRSSALDQPQPAAWTRAAPALTRLRTPQRPPAAPRGRLTGRNVCGGQCCPGWTRAN
STNHCLKPVCEPPCQNRGSCSRPQLCVCRSGFRGARCEELIPEEEFDPRNARPAPRRSAE
AAPSPRRGTASREHPEARTQPRASQLPPPPAARTLSGLSQTRPPQQHTGLSRTVRRYPAT
AASGQLTSNVLPMGAGPEPRAGAQQAAPPWGLNLTEKIKKIKIVFTPTICKQTCTRGHCA
NSCERGGTTTLYSQGGHGHDPQSGFRIYFCQIPCLNGGRCIGRDECWCPSNSTGKFCHLP
APQPNREPQVRGSHRGALLEGPLKQSTFTLPLSNQLASVNPSLVKVHIHHPPEASVQIHQ
VARVRPEAERAPDDNSVEPRPPAQLPAGPGPGHWDSNTIPARSGEHPRPVPPAVLRPQGL
LGRCYLSTVNGQCANPLLELTTQEDCCGSVGAFWGVTSCAPCRPRPASPVIENGQLECPL
GYKRLNLTHCQDVNECLALGLCQDSECVNTRGSYLCTCRPGLMLDPSRSRCVSDKAVSMH
QGLCYRSLGPGTCTLPLAQRITKQICCCSRVGKAWGSQCEKCPLPGTEAFREICPAGHGY
TYSSSDIRLSMRKAEEEELARPSREQQQKSSDPLPAAAERQPLRAATDTWLEAATVSMSD
KDASLAVAGQCLVTPMQETRWPWYGELILRRAQYPSGSLIVGTDKAREAEGIDRCATGAA
NICGPGTCVNLPDGYKCVCSPGYRLHPSQAYCTDDNECLRDPCAGKGRCVNSVGSYACFC
YPGYTLATSGVLPECQDVDECEQPGVCSGGQCTNTEGSYHCTCDRGYVMVRKGQCQDVDE
CHHPGTCPHGRCINSPGSYTCQACEEGYRGQSGSCVDVNECLTPGVCAHGKCINLEGSFR
CSCEQGYELTSDEKGCQDVDECANRASCPMGLCLNTQGSFTCSACESGFWVNEDHTACED
LDECAFPGVCPTGVCTNTVGSFSCKNCDEGYQPSPLGHTCIYVDECEDPQSSCLGGECRN
TAGSYQCLCPKGFQLANGTMCKDMDECREEEHCAPHGECLNSPGSFFCLCAPGFSSVEGG
TSCQDVDECASTDPCLRGHCVNTEGSFHCLCDPGFQPSADSKECVDIDECEERSGELVCG
TGKCENSPGSFHCVLGCQPGFHRAPTGDCIDIDECANDTLCGSHGFCDNTDGSFRCLCDQ
GFETSPLGWDCVDVNECELMLAVCGDALCENVEGSFLCLCASDLEEYDAQEGRCRPRGPA
GQNIPEAPTGHQPVGPMRAECYSGQVGQPACSSRLGQNTTQAECCCTQGRGWGDTCDPCP
FEDSVEFSELCPSGRGYIPVEEAWMFGQTMYTDANECAMFGPALCPHGRCLNTVPGYICL
CDPGYHYDATHRKCQDHDECQDMACEDGECVNTEGSFHCFCNPPLTLDLSGQRCVNSSGN
LEDLPDHDIHTDICWKRVTHDVCSEPLRGRHTTYTECCCQDGEAWSRQCALCPPRSSEVY
AQLCNVARIEAEREAGVHFRPGYEYSPGPDDLQYGLYGPDGAPFYNYLGPEDTIPELPFP
NAASPPGDRTPIPESPLQPSELEPRYVASQPEPQAGFEGLQAEECGILNGCENGRCVRVR
EGYTCDCFEGFQLDAAHMACVDVNECDDLNGPAALCGHGHCENTEGSYRCHCSPGYVAEA
GPPHCAAKEQQ
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccggccacctccagccgtccggggggcacctgctggaacccccgaaagggc
ttcctgccgcagctcatcctggccctcctggtggccatgggtcatgcccagagggacccg
gtggggagatacgagctggccggcagggacgcggctcggctgcggcgccctggagccagc
caccccgcagcagcagctgcagccaaggtgtacagcctgttccgcgagcaggacccgccc
gtcccgggcttgccgcccgcggagcggacgcagccgggctgggggagccccaggaggctc
gccgaagccgaggccaggaggccgtaccgcgcgcagaactcgctgcgccgaatccagcca
cctgcgcagaatcggagaagcagcgccctggaccagccgcagcccgcagcctggacccgg
gcggcgccggctctcacgcgccttcgaaccccgcaacggcccccggcggcgccgcgaggg
cggctcacggggaggaacgtctgcgggggacagtgctgcccgggatggaccagagccaac
agcaccaaccactgtctcaaacccgtgtgcgagcccccgtgccagaaccgggggtcctgc
agccggccccagctctgcgtctgccgctcgggtttccgcggtgcccgctgcgaagagctc
attcccgaggaagagttcgacccccggaacgcgcggcccgcaccacggcgctccgccgag
gccgcccccagcccgcgcaggggcacagcgtccagagaacaccccgaggccagaacgcaa
ccgcgggcatcccagctgccaccgccaccagctgccaggaccctgagtggactcagccag
acccggcctccccagcagcacaccgggctctcacggactgtccgacgttacccagccacg
gctgccagtggccagttgacttccaatgtgctgccgatgggagcagggccagaacccagg
gctggtgcccagcaggctgcacccccctgggggctgaatctcacggagaagatcaagaag
atcaagattgtcttcacgcccaccatctgcaagcagacgtgtacccgtggacactgtgcc
aacagctgtgagcggggtggcaccaccaccctgtacagccaggggggccatgggcatgac
ccccagtctggcttccgcatttatttctgtcagattccctgcctgaacggaggccgctgc
attggccgggatgagtgctggtgcccctccaactccactggcaagttctgccacttgcct
gccccgcagcccaacagggagccccaagtaaggggctcgcaccgtggggccttgctggaa
ggcccactgaagcagtccaccttcactctgcctctctccaaccaactggcctctgtgaac
ccatcgctggtgaaggtacacatccaccacccgcccgaggcctctgtgcagatccaccaa
gtggcccgggtgcggcccgaggccgagagggccccagatgacaacagtgtggagcccagg
cccccagcacagcttcctgccggtcccggccctggccactgggacagcaacaccatccct
gctcggtcaggagagcaccctcggccagttcccccggcagtgctcagaccccagggactg
ctgggtcgctgttacctcagcaccgtgaatggacagtgtgccaaccccctgctggagctg
accacccaagaggactgctgtggcagcgtgggggccttctggggggtgacttcgtgtgcc
ccttgccggccaagaccagcctccccagtgattgaaaatggccagctggagtgtcccctg
gggtataagaggctcaacctcactcactgccaagatgtcaacgagtgcctggccctgggc
ctgtgccaggactcggagtgtgtgaacaccaggggcagctacttgtgcacctgcagacct
ggcctcatgctggatccatcacggagccgctgtgtgtcggacaaggctgtgtccatgcat
cagggactgtgttaccgatccctggggcccggcacctgcaccctacctctggcccagcgg
atcaccaagcagatctgctgctgtagccgagtgggcaaagcttggggcagccagtgtgag
aaatgccccctgcctggcacagaggccttccgggagatctgccctgccggccatggctac
acctactccagctcagacattcgcttgtccatgaggaaggctgaggaggaggagttggcc
aggccctcacgggagcaacaacagaagagcagcgatcccctgcctgcagcagcagagaga
cagcccctccgggcagccactgacacttggcttgaggctgcaactgtctctatgtctgat
aaggatgcctctcttgctgtggctggccagtgtctggtgacccccatgcaggagactcgg
tggccgtggtatggggagctcatccttcgaagagcacagtaccccagtgggagcctgatt
gtgggcactgacaaggccagggaggcagaaggcattgaccgatgtgctactggcgcagcc
aacatctgtggcccaggaacctgtgtgaacctcccagatggatacaaatgtgtctgcagc
cctggctaccggctgcaccccagccaggcctactgcacagatgacaacgagtgtctgaga
gacccctgtgcaggaaaagggcgctgcgtcaacagcgtgggctcctacgcctgcttctgc
taccctggctacacattggccacctcaggggtgctgccagagtgccaagatgtggacgag
tgtgagcagccaggagtgtgcagcggagggcaatgcaccaacacggagggctcctaccac
tgtacatgtgaccggggttatgtcatggtgaggaagggccaatgccaagatgttgacgaa
tgccatcacccgggcacctgcccccacgggagatgcatcaactctcctggctcctacacc
tgccaggcctgcgaagaggggtaccgaggccagagtggtagctgtgtagatgtgaacgag
tgtctgacccctggggtgtgtgcccatggaaagtgcatcaacctagaaggttctttcaga
tgctcctgtgagcagggctatgagctcacctctgacgagaagggctgccaagatgtggat
gaatgtgccaaccgagcctcatgccccatgggcctctgcctcaatacccagggctctttc
acctgctcggcctgtgagagtgggttttgggtaaatgaagaccacactgcctgtgaagat
ctggacgagtgtgccttcccgggagtgtgccccactggggtctgcaccaacaccgtgggc
tccttctcctgcaagaactgcgatgagggctaccagcccagcccactgggccacacctgc
atatatgtggatgagtgtgaagacccccagagcagctgccttggtggtgagtgcaggaat
acagctggctcctaccagtgcctgtgtcccaagggcttccagctggccaacggcactatg
tgcaaggacatggatgagtgtcgagaggaggagcattgcgcacctcatggcgagtgtctc
aacagccctgggtctttcttctgtctctgtgcacccggcttctcgagcgtggagggaggc
accagctgccaggatgtggatgagtgtgcaagcacagacccatgtctgaggggacactgt
gtcaacactgagggttctttccactgcctgtgtgaccctggcttccagccctctgcagac
agcaaggagtgtgtggatattgatgaatgtgaggagcgcagtggagagctggtatgtggg
accgggaagtgtgagaacagccctggctccttccactgtgtcttgggctgccagccgggc
ttccacagggccccaactggagactgcattgacatagatgagtgtgccaacgacaccctg
tgtgggagccatggcttctgtgacaacacagatggctcgtttcgttgcctctgcgaccag
gggtttgagacctcacccttgggctgggattgtgtagatgtgaatgagtgtgagctcatg
ttggccgtgtgtggggacgcgctctgcgagaatgtggagggctccttcctgtgtctctgt
gctagcgacctggaagagtacgacgcccaggaggggcgctgccgcccgcggggtcctgca
ggtcagaacattcctgaggctcccacggggcaccaaccggtgggccccatgcgtgccgag
tgctactccgggcaggttggccagccagcttgctccagccgcctgggccagaacaccacc
caggcggagtgctgctgcacccagggcaggggctggggagacacctgtgacccctgccca
tttgaggactcagtggagttcagtgagctgtgccccagcggcagaggctacattcctgtg
gaagaggcctggatgttcgggcagaccatgtacacagatgccaatgagtgtgcgatgttt
gggcctgctctctgtccccacggccgctgcctcaacaccgtgcctggctacatctgcctg
tgtgatcctggctaccactatgacgctacccacaggaagtgccaggatcacgatgagtgc
caggacatggcctgtgaggacggtgagtgtgtgaacacagaaggctcctttcactgtttc
tgcaacccacccctcaccttggacctaagcggccagcgctgtgtcaacagctctggcaac
ctggaggacctccctgaccatgacatccacacggacatctgctggaagagagtcactcat
gacgtatgcagtgagcccctacgcgggcgccacaccacctatactgagtgctgctgccag
gatggcgaggcctggagccgccagtgcgccctgtgcccccccaggagctctgaggtctac
gctcagctgtgcaacgtggccaggattgaggcagagcgggaggctggggtccacttccgg
ccaggctacgagtacagccctggccctgatgacctgcagtatggcctctatggcccggac
ggagcccccttctacaactacttgggccctgaggacaccatccctgagctgccatttccc
aacgctgccagccccccaggggatcgcactccaattccggaatctcctctgcagccctcg
gagctcgagccccgctatgtggccagccagccagagccccaggctggcttcgaagggctg
caggccgaggagtgtggcatcctgaacggctgtgagaatggccgctgtgtgcgcgtgcgg
gaaggctacacctgcgactgctttgagggcttccagctggatgcagctcacatggcctgc
gtggatgtgaatgagtgtgacgacctcaatgggcctgctgcgctttgtggccatggtcat
tgtgagaacaccgagggctcctaccgctgccactgctccccaggttatgtggctgaggca
ggccccccgcactgtgctgccaaggagcagcagtga
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