Ochotona princeps (American pika): 101536701
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Entry
101536701 CDS
T07609
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03082
ATP-dependent chromatin remodeling
opi04714
Thermogenesis
opi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101536701 (SMARCD3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101536701 (SMARCD3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101536701 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101536701 (SMARCD3)
03036 Chromosome and associated proteins [BR:
opi03036
]
101536701 (SMARCD3)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101536701 (SMARCD3)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101536701 (SMARCD3)
PBAF complex
101536701 (SMARCD3)
GBAF(ncBAF) complex
101536701 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DUF5529
Motif
Other DBs
NCBI-GeneID:
101536701
NCBI-ProteinID:
XP_004594460
LinkDB
All DBs
Position
7A:8708534..8718382
Genome browser
AA seq
483 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQV
KRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSH
DKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDI
DVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYV
QDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVV
RNT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgtcccgggatgccgtctggagccaggatgccccaccagggg
gcgcccatgggtcccccgggctcaccgtacatgggcagccccgccgtgcgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccag
gcccagagccaaggccagccggtgcccaccgcccccgcgcggagtcgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggatccgggagttggtcccggagtcccag
gcttacatggacctgctagcgtttgagaggaaactggatcagaccatcatgcggaagcgg
gtggatatccaggaggctctgaagcggcccatgaagcaaaagcggaagctgcgtctctac
atctccaacactttcaaccccgccaagcctgatgcagaagactccgatggcagcatcgcc
tcctgggagctgcgggtagaggggaagctcctggatgatcccagcaaacagaagcggaag
ttctcttccttcttcaagagtttggtcattgagttggacaaggacctttatggcccagac
aaccaccttgttgagtggcatcggacacctacaacccaggagacagatgggttccaggtg
aagaggccaggggacctgagtgtgcgctgcacactgctcctcatgctggactaccagcct
ccccagttcaaactggaccctcgcctggcccggctgctggggctgcacacacagagtcgc
tcggccattgtccaggccctgtggcagtacgtgaagacaaacaggctgcaggactcccat
gacaaggaatacatcaatggggacaagtatttccagcagatttttgattgtccccgactg
aagttttctgagattccccagcgcctcacagccctgctgctgccccctgacccgattgtc
atcaatcatgtcatcagtgtggacccatcagaccagaagaagacggcatgctacgacatt
gacgtggaggtggaagagccactgaagggacagatgagcagcttcctcctgtccacggcc
aaccagcaggagatcagcgccctggacagtaagatccatgagacgatcgagtccataaac
cagctcaagatccagagggacttcatgctaagcttctccagagaccccaaaggctacgtc
caggacctgttgcgctcccagagccgggacctcaaggtgatgactgacgttgctgggaac
cccgaggaggagcgccgggccgagttctaccaccagccctggtcccaggaagctgtcagc
cgctacttttactgcaagatccagcagcgcaggcaggagctggagcagtcgctggttgtg
cgcaatacctag
DBGET
integrated database retrieval system
