Ochotona princeps (American pika): 101536780
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Entry
101536780 CDS
T07609
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04020
Calcium signaling pathway
opi04024
cAMP signaling pathway
opi04080
Neuroactive ligand-receptor interaction
opi04082
Neuroactive ligand signaling
opi04713
Circadian entrainment
opi04720
Long-term potentiation
opi04724
Glutamatergic synapse
opi05010
Alzheimer disease
opi05014
Amyotrophic lateral sclerosis
opi05017
Spinocerebellar ataxia
opi05020
Prion disease
opi05022
Pathways of neurodegeneration - multiple diseases
opi05030
Cocaine addiction
opi05031
Amphetamine addiction
opi05033
Nicotine addiction
opi05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101536780 (GRIN2C)
04024 cAMP signaling pathway
101536780 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101536780 (GRIN2C)
04082 Neuroactive ligand signaling
101536780 (GRIN2C)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101536780 (GRIN2C)
04720 Long-term potentiation
101536780 (GRIN2C)
09159 Environmental adaptation
04713 Circadian entrainment
101536780 (GRIN2C)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101536780 (GRIN2C)
05014 Amyotrophic lateral sclerosis
101536780 (GRIN2C)
05017 Spinocerebellar ataxia
101536780 (GRIN2C)
05020 Prion disease
101536780 (GRIN2C)
05022 Pathways of neurodegeneration - multiple diseases
101536780 (GRIN2C)
09165 Substance dependence
05030 Cocaine addiction
101536780 (GRIN2C)
05031 Amphetamine addiction
101536780 (GRIN2C)
05033 Nicotine addiction
101536780 (GRIN2C)
05034 Alcoholism
101536780 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101536780 (GRIN2C)
Ion channels [BR:
opi04040
]
Ligand-gated channels
Glutamate (ionotropic)
101536780 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
101536780
NCBI-ProteinID:
XP_004592993
LinkDB
All DBs
Position
19:4274985..4286904
Genome browser
AA seq
1243 aa
AA seq
DB search
MGGTLRPALLLTSLLGAWAGLGLGQGDQAVTVAVVFGSSGFQQAQARPRLTSQNFLDLPL
EIQPLTVGVNHTNPSSLLTQICGLLGAAHVHGIVFEDNVGTEAVAQLLDFVSSQTHAPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLNVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYVSWRLLDVLTLELGPGGPRARTQRLLRQLDAPVLVAYCSRDEAEVLFTEA
AQAGLVGPGHVWLVPSLALGSTDTPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HSYQRQHGALPAPAGNCQGHPGPVSPAREAFYRHLLNISWEGRDFSFSPGGYLVQPTMVV
IALSRHRLWEMVGRWERGVLHMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVETPD
PGTGGCVPNTVPCRRHSNHTFSSRDAAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN
GKHGKRVRGVWNGMIGEVYYRRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTRGKKPGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQF
LGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY
WRLRHSVPSSSQLDFLLAFSRGIYSCFSGVQSLASPAPPPSPDLTAGSAAQANVLKMLQT
ARDMVTTAGVSSSLDRATRTIQSWGSSRRAPAPSACSASGPACCPRPAASGVLPEPSTRV
WEAPGTSRVPLGHRAPQPSCRPPTPRPLPPGVSRASCRPARGAQWPARTGRGVRHLGASE
RCLWPERPLAPAPCRYSSFPRAERSGRPFLALFPEPREPVDLPLLGPEQLARREALLRAA
WAQGRRPRHASLPSSVAEVFARPCPLPVRCRCSACSCLNGDVACRSLAQAQSRRLPSYGE
ACLEGAPEGLPGWRHRGQVCLHSHGHLPFCWGAVCPHLPPCASHGPWFPGAWGLPAHGGR
TLGLSTGYRDCGGPAEVGAGGCEKQDFPRPCVWRRISSLESEV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggaccctgaggccggccctgctgctcacctcgctgcttggtgcctgggcaggc
ttgggcctggggcagggtgaccaagccgtgacggttgctgtggtattcgggagctctggg
ttccagcaggcccaggcccgcccccgcctcacctcccagaatttcctggacctgcccctg
gagatccagccgctcaccgtgggcgtcaaccacaccaaccccagcagccttctcacccag
atctgtggcctcctgggtgccgcccacgtccacggcatcgtcttcgaggacaacgtgggc
accgaggcggtggctcagctcctggactttgtctcctcccagacgcacgcgcccatcctc
agcatcagcgggggctctgcggtggtcctcacccccaaggagccgggctccgccttcctg
cagctgggtgtgtccctggagcagcagctgaacgtgctgttcaaggtattggaggagtac
gactggagtgccttcgctgtcatcaccagcctgcacccgggccacgcgctcttcctggaa
ggtgtgcgtgctgtagctgatgccagctatgtgagctggcggctgctggacgtgctgaca
ctggagctaggccctggtggaccacgggcacggactcagcgcctgctgcgccagctggat
gcacctgtgctggtggcctactgctcccgtgacgaggctgaggtgctgttcactgaggcg
gcacaggctggcttggtagggcctggtcatgtgtggttggtgcccagcctggcactgggc
agtactgacacgccccctgcagccttccctgtgggcctcatcagtgtggtcaccgagagc
tggcgtctcagcctgcgccagaaagtccgcgacggcgtggccatcctggctctgggtgcc
catagctaccaacgccagcatggcgctctgcctgcgccagctgggaactgtcaaggtcac
cctgggccagtcagccctgctcgggaggctttctacaggcacttactgaacatctcctgg
gagggccgagacttctccttcagcccgggtgggtacttggtgcagcccaccatggttgtg
atcgcactcagccggcatcgcctctgggagatggtggggcgttgggagcgtggtgtcctg
cacatgaagtacccagtgtggcctcgctacagtgcctccctgcagcctgtggtggacagc
cggcacctgacagtggccacactggaagagcgacccttcgtcattgtggagacccctgac
cctggcactggtggctgtgtccccaacaccgtgccctgccgcaggcacagcaaccacacc
tttagcagcagggacgccgcgccctacaccaagctgtgctgtaagggcttctgcatcgac
atcctcaagaagctggccaaggtggtcaagttctcctatgacctgtacctggtgaccaat
ggcaagcacggcaagagggtgcgcggtgtgtggaacggcatgatcggggaggtgtactac
aggcgggcggacatggccatcggctccctcaccatcaacgaggagcgctctgagattgtt
gacttctccgtgcccttcgtggagacaggcatcagtgtcatggtggcacgtagcaatggc
accgtctccccttctgccttcctggagccctacagccccgccgtgtgggtgatgatgttt
gtcatgtgcctcaccgtggtggccatcaccgtcttcatgtttgagtacttcagccccgta
agctacaaccaaaacctcaccagaggcaagaagcccgggggcccatccttcaccattggc
aagtccgtgtggctgctgtgggcactggtcttcaacaactcggtgcccatcgagaaccca
cggggtaccaccagcaagatcatggtcctggtctgggctttcttcgccgtcatcttcctc
gccagctatactgccaacctggccgccttcatgatccaggaacaatatattgatactgtg
tctggtctcagcgacaagaagttccagaggccccaggatcagtacccacccttccgcttt
ggcacggtgcccaacggcagcacagagcgcaatatccgcagtaactaccgtgacatgcac
acgcacatggtcaagttcaaccagcgctctgtggaggacgcgctcaccagcctcaaaatg
gggaagctggacgccttcatctatgatgctgctgttctcaactacatggccggcaaggat
gagggctgcaagctggtcaccattggctccggcaaggtcttcgccaccacaggctatggc
attgccatgcagaaggactcacactggaagcgggccatcgacctagcactgctgcagttc
ctgggggacggagagacacagaaactggagacggtctggctgtcggggatctgccagaat
gagaagaatgaggtgatgagcagcaagttggacattgacaacatggcgggtgtcttctac
atgctgctggtggccatggggctggcgctgctggtcttcgcctgggaacacctggtctac
tggaggctgcggcactcggtgcccagctcatcccagctggacttcctgctggctttcagt
aggggcatctattcctgcttcagtggagtgcagagcctagccagccccgcgccaccaccc
agccccgacctcacagccggctcagcggcgcaggccaacgtgctcaagatgttgcagacg
gcgcgggacatggtaaccacggcgggggtcagtagctccctggaccgcgccacgcgtacc
atccagagctggggcagcagccgtagggcgccggcgccgtctgcctgctctgcctcgggg
cctgcgtgctgcccgcgcccggctgcttccggggtgctccccgagcccagcaccagggtt
tgggaggcgccaggtacaagtcgcgtccctctagggcacagggccccgcaaccctcgtgc
cgtcccccgacgcccaggccgctcccgcccggtgtctcccgagcatcctgtcggcccgcc
aggggggcgcagtggccagcacgcaccgggcgaggcgtgcggcacctcggggcttctgag
cggtgcctgtggccagagcgccctctggcccccgcaccctgccgctacagctccttccct
cgggctgaacgctcggggcgcccctttcttgcgctcttccccgagccccgggagccggtg
gacctaccactgctggggccggaacagctggcccggcgagaggctctgctgcgcgcggcc
tgggcccagggccggcgtccgcgccacgcctccctgcccagctcggtggctgaggtcttc
gctaggccctgtccgctgcctgtccggtgcaggtgctcggcgtgctcctgcctcaacggc
gacgtggcctgtaggagcctggcgcaggcgcagtccaggcggctgccgtcctacggggag
gcctgcctggagggcgcacccgaggggctccctggctggaggcatcgtgggcaagtctgc
ctgcactcccacggccacctgccgttttgctggggggccgtgtgtcctcatctcccaccc
tgtgccagccatggcccctggttccctggggcctgggggcttccggcacacgggggcagg
accctgggattgagcacaggctacagggactgtggggggccagcagaggttggcgcaggg
ggttgtgagaaacaagactttccccgaccctgtgtctggaggcgcatctccagcttggag
tcagaagtttga
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