Ochotona princeps (American pika): 101536785
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Entry
101536785 CDS
T07609
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
opi01001
]
101536785 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101536785 (TRIM24)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101536785 (TRIM24)
Protein kinases [BR:
opi01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
101536785 (TRIM24)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101536785 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
101536785
NCBI-ProteinID:
XP_012785034
LinkDB
All DBs
Position
7A:complement(5094914..5200097)
Genome browser
AA seq
1019 aa
AA seq
DB search
MEAAVEKAAAAAAAPAAAAGGPSATAAGGENEAESRQGPDSERGCEAARLNLLDTCAVCH
QNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAETPPPAGGSLPFPGAFSGSPT
QFATRFGVIRCPVCSQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFC
VECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCE
TCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKFTGNQIQNRII
EVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQL
EHVMHFSKWAVSSGSSTALLYSKRLVLELYNLDTKSERIRQYKLIWHCKLVKKYDRSSSR
DSDSSLVIEDKDSQPQMPKQNPIVEQNSQPSGGLSSNQLSKFPTQISLAQLRLQHMQQQQ
PPPRLINFQNHSSKPNGPVLPPHPQQLRYPPNQNVPRQTIKPNPLQMAFLAQQAIKQWQI
SSGQGTPSTASSTSSTPSSPTITSAAGYDGKSFGSPMIDLSSPVGGTYNLPSLPDIDCSS
TIMLDNIGRKDTSIDSGQPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPPIRSPSASSI
GSRGSSGSSSKPAGADSTHKVPVVMLEPIRIKQENSAPPENYDFPVVIVKQESDEESRPQ
NTSYPRSILTSLLLHSGQSSASEETVVRSDAPDSTGDQPGLHLENSSSGKSEWLDASQKS
PLHVGETRKEDDPNEDWCAVCQNGGELLCCDKCPKVFHLSCHVPTLTNFPSGEWICTFCR
DLSKPEVEYDCDAHGHSSEKRKAESLSKLTPVDKRKCERLLLFLYCHEMSLAFQDPVPLT
VPDYYKIIKNPMDLSTIKKRLQDDYSLYTKPEDFVADFRLIFQNCAEFNEPDSEVANAGI
KLENYFEELLKNLYPEKRFPKLEFGNEFEDNKFSDDSDDDFVQPRKKRLKSIEERQLLK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggctgtggagaaggcggcggcggcggcggccgctccggcagctgccgccggg
gggccctcggcgacggcggcgggcggagagaacgaggccgagagtcggcagggcccggac
tcggagcggggctgcgaggcggcccggctcaacctgttggacacttgcgccgtgtgccac
cagaacatccagagccgggcgcccaagctgctgccttgcctgcactccttctgccagcgc
tgcctgcccgcgccgcagcgctacctcatgctgcccgcacccatgctgggctcggccgag
accccgccgcccgcgggcggctccctgcccttcccaggagccttttctgggtctcccaca
cagtttgccacaagatttggagtcatccggtgcccagtttgcagccaagaatgtgcggag
agacacatcatagataacttttttgtgaaggacactaccgaggtccccagcagtacagta
gaaaagtctaatcaggtgtgtacaagctgtgaggacaatgcagaagctaatggattttgt
gtagagtgtgttgaatggctgtgtaagacatgtatcagagctcatcaaagggtgaaattc
acaaaagaccacaccgtaagacagaaagaggaagtatctccagaggcggttggtgtgacc
agtcagcggccagtgttttgtccttttcataaaaaggagcagttgaaactttactgtgag
acttgtgacaaactgacatgtcgggattgccagctgttagaacataaagagcatagatac
caatttatagaagaagcttttcagaaccagaaagtgataatagacacactaatcaccaaa
ctaatggaaaagacaaaatacataaaatttacaggaaatcagatccaaaatagaataatt
gaagtcaatcaaaaccaaaaacaggtggaacaggatattaaagttgctatatttacattg
atggtagaaataaacaagaaaggaaaagctctcctgcatcagctagagagccttgcaaag
gaccatcgtatgaaacttatgcaacagcaacaggaagtggctggactttctaaacagttg
gaacatgtcatgcatttttctaaatgggcagtttccagtggcagcagtacagcattactt
tatagcaagcgactggttcttgagctgtataaccttgacactaaatctgaaagaattcgg
cagtacaaactcatctggcattgtaaactcgtcaagaaatatgacaggagtagcagtaga
gatagtgatagttctttagtaatcgaggataaagacagccagccgcaaatgcctaagcag
aatcctatcgtggaacagaattcccagccctcaggtggcttatcttccaaccagttatcc
aagtttccaacacagatcagcctagctcaattacgactccagcatatgcagcaacagcaa
cctcctccacgtttgataaattttcagaatcacagctccaaacccaatgggccagttctt
cctcctcatcctcagcagctgagatatccaccaaaccagaatgtaccccgacaaacaata
aagcccaaccccttgcagatggctttcttggctcaacaagcaataaagcagtggcagatc
agcagtggacagggtacaccatccactgccagcagcacgtcttccactccttctagtcct
accatcactagtgcagcagggtatgatgggaagtcttttggatcacctatgatagatctg
agttcaccagtgggtggcacttacaatcttccttcacttccagatattgactgttcaagt
actataatgctggacaacattggaaggaaagatactagtatagactctggccaacccaga
ccaccgtcaaacaggacggtgcagtcaccaaactcatcagtaccttctccaggccttgca
ggacctgttactatgactagtgtacatcctccaatacgctcacctagtgcctccagcatt
gggagccgaggaagctctggctcttccagcaaaccagcgggagctgattctacacataaa
gtcccagtggtcatgttggagccaatccgaataaaacaagaaaacagtgcaccacctgaa
aattatgattttcctgttgttatagtgaaacaagaatctgatgaagaatctaggcctcag
aataccagttatcctagaagcatccttacttccctgctgttacatagtggccagagctct
gcttctgaagagactgtggtaagatctgatgcgcctgatagcacaggagatcagcctgga
ttgcacctggagaattcctcaagtggaaagtctgagtggctggatgcctcccagaagtct
cctcttcacgttggagagacgaggaaagaggatgatcccaatgaggactggtgtgcagtg
tgtcagaatggaggggagctcttatgttgcgacaagtgtcccaaagtattccatctctct
tgtcacgtgcccacactgacaaattttccaagtggagagtggatttgtactttttgccga
gacttatctaaaccagaagttgaatatgattgtgatgctcatgggcacagctcagaaaaa
aggaaagctgaaagcctcagtaagttaacaccagtagataagaggaagtgtgaacgtcta
cttttatttctttactgccatgaaatgagtctcgcttttcaagatcctgttcctctaaca
gttcctgattattataaaataattaaaaaccccatggacttgtcaaccattaagaaaaga
ctgcaagacgattactccctgtatacaaagcctgaagattttgttgctgattttaggctt
atctttcaaaactgtgcagaattcaatgagcctgattcagaagtagctaacgctggtata
aaacttgaaaactattttgaagaacttctaaagaacctttatccagaaaaaagatttcct
aaactagaattcgggaatgaatttgaagataataaatttagtgatgattccgatgatgac
tttgtacagccccggaagaaacgcctgaaaagcatcgaggagcgtcagttgcttaaataa
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