Ochotona princeps (American pika): 105942243
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Entry
105942243 CDS
T07609
Name
(RefSeq) leukocyte surface antigen CD47-like isoform X1
KO
K06266
CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04148
Efferocytosis
opi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105942243
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105942243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
105942243
04515 Cell adhesion molecules [BR:
opi04515
]
105942243
04090 CD molecules [BR:
opi04090
]
105942243
Transporters [BR:
opi02000
]
Other transporters
Pores ion channels [TC:
1
]
105942243
Cell adhesion molecules [BR:
opi04515
]
Immunoglobulin superfamily
Other
105942243
CD molecules [BR:
opi04090
]
Proteins
105942243
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD47
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
105942243
NCBI-ProteinID:
XP_012784688
LinkDB
All DBs
Position
14:complement(68643332..68684201)
Genome browser
AA seq
294 aa
AA seq
DB search
MWPLVAALLLWLADYGSFQMLFKKIKDVTLTRCNKTAVIPCFVTNVEAQKFSEVFVKWKY
NGSVIFFYDGFLNISHYYFNFTSAKVELMNLLKGDASLQLEKHQALLGNYTCEFSELSRE
GEMTVELKHRSVLWISLSERVLFTAFPILSVILFWGQFCVVTLKYKISLAIYLLLIPGIL
LTILVIIGVGLAIPGEYPKRESSGVSLFVSSSTMLIAAHFRVLKLVCGITYVAIAILVFQ
LLGLLLALVGLILCALACVAIHGPLLISGLGIITLAELFGLIYITLCGSSLLLH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctttggtggcagcgctgctgctgtggctagcggattatggttcttttcagatg
ctttttaaaaaaatcaaagatgtaacactcactcgatgtaataaaactgctgttatccca
tgttttgttacaaatgtggaggcacaaaagtttagtgaagtgtttgtaaaatggaaatat
aatggaagtgtgattttcttctatgatggttttctaaatatttcccattattactttaac
tttacaagtgcaaaagttgaactgatgaatttactcaaaggagatgcctctttgcagttg
gagaagcatcaagctctcttaggaaactatacatgtgaattttctgaattaagcagagaa
ggggaaatgactgtagaactgaaacatcgctctgttttatggatttctcttagtgaacgt
gtgctctttactgctttcccaattttgtctgtaattttattctggggacagttctgtgtt
gtaacattgaaatataaaatcagtcttgcaatttatctgttacttattcctggaatacta
cttaccatacttgtcattattggagtgggccttgctataccaggtgaatatccaaaaagg
gaatcttctggggtttctttatttgtaagttcttcaacgatgttaatagcagctcatttc
cgtgtgcttaaattagtttgtggcataacctacgttgccattgccatattggtattccag
ttactgggccttctgcttgctctagttggactgattctctgtgctttagcttgtgtggca
atacatgggcctcttctgatttcaggtttgggtatcataactcttgcagaattatttgga
ctaatttatataacactttgtggttcgtcactcttacttcattag
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integrated database retrieval system
