Ochotona princeps (American pika): 105942442
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Entry
105942442 CDS
T07609
Symbol
SLC6A16
Name
(RefSeq) orphan sodium- and chloride-dependent neurotransmitter transporter NTT5
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
105942442 (SLC6A16)
Transporters [BR:
opi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105942442 (SLC6A16)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
105942442
NCBI-ProteinID:
XP_012785768
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Position
5:2189039..2201090
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AA seq
737 aa
AA seq
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MTSEAREVEHVVSKSSSIETKLSEGFRGILGWEDEGAAAPVSEAQATAARAARAQVWEAH
ASEAKGRTGYPKHVSELRMRSSSLLKQIFSNEEFLVDEEEGSKALTRPVWSDKVEYILAQ
LGYNLKPSNMWWFVSLWLHCGGCNFLLIYILLLFLVGIPLLLLELAAGQRLRLSSVALWK
VVSPWSSGVGYSSFMVCFFSSMYLNVVNAWFLFYLSQSIQSPAPWEKCPLLKNASDFDPA
CARTTPFMYFWYQQTLKASDRFEDGGPPVRSLTLPLFVAWCLVGTFVSNGIKSMGKVMYV
LIPLPYFMIVCFLFWSLLLDGATYGLEYLVVAKVSSIYNIRVWSLTGCQVLFNLGLGFGP
VASLASHMDPSNNCLSDAFVIAVINLFTMLITMPFIFSVLGFRATVLTYRCNEKNVAMLM
DLVAAGQLPPEAQPPTYLQGNPSAGYSTWLEGLPQVLKQQVHSKVPQCSLKEHFLKFEDG
RGFVFLAFIEAMSFLPGSTLWSILFFVMLLVLTLSTMAGFLQGLMMPLQDAFCLLRRHKK
LFAVSISLLMFLCSLFFIRPPGVYFITLMNNYWIIVPIIIIVMCENMTIVWAYGAKRFLA
DVRVLVGHPVSPVYYWLWCSLCPVMLLLMFVTTVFFLATKNFSYTAWNSSSSREELRWYP
SWARALMSLLWFLVIGPIPAHLGYSLLYDIRFRAEMQGQRTGAPSALLLGNQIMPRPEAS
REEYLQGGQTEAAQPVA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggaggcacgagaggtggagcacgtggtgtccaaatcctcctcgatcgagacg
aagctctctgagggcttcagaggaatcctgggctgggaggatgagggcgcggcagcccct
gtctccgaggcccaggcgacagcagcccgggccgccagggctcaggtctgggaggcccat
gcctcagaggccaagggcaggactggctacccgaagcacgtgtctgagttacgcatgaga
agttcctcattgcttaagcaaatcttctccaacgaggagttcctggtggatgaggaagaa
gggagcaaggcgctgactcgcccggtctggtctgacaaggtggaatacatcctggcccag
ctgggctacaacttgaagccatccaacatgtggtggttcgtcagcttgtggctccactgt
ggaggctgtaacttcctcctcatctacatcctcttgctgttcctggtcggcattcccctg
ctcctgctggagctggccgctggccagcggctgcgcctgagcagcgtggctttgtggaag
gtcgtcagcccctggagcagcggtgtgggctacagcagctttatggtgtgcttcttctcc
agcatgtacttgaatgtggtcaatgcctggttcctcttctatttgagccagtccatccaa
tctcctgccccatgggagaaatgtcccttactcaagaatgccagcgactttgatcctgcg
tgtgcgcggacaacgcccttcatgtacttctggtaccagcaaaccttgaaggcctccgac
agatttgaggatggagggcctccggtccgcagtctgaccctgcccctcttcgtagcctgg
tgtcttgttgggacttttgtatccaatggaatcaagtccatgggaaaggtcatgtatgtc
ctgataccactcccttacttcatgatcgtgtgtttcctcttctggagtctgctgctggat
ggggcgacgtacggccttgagtatctggtggttgccaaggtgtcatccatctacaacatc
cgggtgtggtccttgacagggtgccaagtgctgtttaacctgggcctgggctttggtccc
gttgcctctttagcctcgcacatggacccgtccaacaactgtctctcggatgcttttgtc
atagcagtgatcaacctgttcaccatgctcatcaccatgcctttcatcttctctgtcctg
ggcttccgggccacagttctcacctaccgctgcaatgagaagaatgttgcaatgctgatg
gatctggtggccgcggggcagctacccccagaggcgcagccccccacgtacctgcagggg
aaccccagcgctggctacagcacctggcttgagggccttccccaggtcctcaagcagcag
gtccacagcaaggtgccacagtgcagcctcaaggaacattttctgaagtttgaggacggc
aggggcttcgtgttcctggcgttcatagaggccatgtcgttcctccccgggtctaccttg
tggtccatcctgttcttcgtgatgctgctggtcctgacgctgagcaccatggccgggttc
ctgcaggggctcatgatgccgctccaggatgctttctgtctcctcaggagacacaagaag
ctctttgcagtctccatctcgttgctcatgttcctgtgcagcctcttcttcatccgcccc
ccaggggtctacttcatcaccctgatgaacaactactggataatcgtgcccatcatcatc
atcgtcatgtgtgagaacatgaccatagtgtgggcgtacggggccaagaggttccttgcc
gatgtcagggtcctggtgggccaccctgtctcccccgtctactactggctgtggtgcagt
ctctgtccagtcatgctgctgctgatgttcgtgaccacggtgttttttcttgccacaaag
aacttcagctacacggcctggaactcgagcagttccagagaggagctgcgttggtacccg
tcgtgggcccgcgccctgatgagcctcctctggttcctggtcatcgggcccatccctgca
caccttgggtacagcctcctctatgacatccgcttccgggctgagatgcagggccagcgg
accggcgctcccagtgcactgctcctggggaaccagatcatgcccaggccagaggcctcc
agggaggaatacctacagggtggtcaaacagaggctgcccagcctgtcgcctga
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