Ochotona princeps (American pika): 118757491
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Entry
118757491 CDS
T07609
Name
(RefSeq) uncharacterized protein LOC118757491
KO
K14416
elongation factor 1 alpha-like protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03015
mRNA surveillance pathway
opi05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118757491
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
118757491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
118757491
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118757491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
Motif
Other DBs
NCBI-GeneID:
118757491
NCBI-ProteinID:
XP_004587309
LinkDB
All DBs
Position
12:complement(123165729..123181252)
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AA seq
631 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDEPSVAEPVEEYDYE
DLKQPSNSISSHQLSEIDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSVV
LEQDNLQNLKDESDGVVSSGKTAKGVLFSSSEISAENTQNSYFQSGKHLNCSSKSFDFSS
SVAKYGLYHKPLVVPSHCLPHRKQKLERPQSEKKLESCKLTRELSVADLIHNIPRDSCTS
QPSVRLSSKDSLENLLSKNPHANLLSHQVLDCVSKDDSAFRGIPDLESLMIKNARPNNSN
NLPPDFQNIPEQSNLASLNNHIQLTSSLENMTLDNLNTDKEVELGSISLVGPSAKNHILK
KDSSQLSQRGSTSLAELFQEHQETSPSQCLTLSDLCSQHSSSSFSDLSLGSFPLSQLANH
CQSSTEISELSGSLSSLAFHKTSPTRDLENLSLSDLIAETIAVDSSQIKKDSLERSSSEM
KSPGIDSNIDLSVLIKTSDFVPKPVVDELVPPTSGTKVLSSRVGKNSSSIKDIKKNKKGS
LSRRTPFSVSWTKALAARPSAFASTLCLRYPLKGHKRRAIDLYKTFLYSRQVQDVKDKEI
SPLVAITPFDFKSPSPDDIVKAHQKQAFTRE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcccgacatcggaacgtcagaggctataattacgatgaagattttgaagatgatgat
ctgtatggtcagtctgtggaggatgattactgtatttctccatcaacagctgctcagttt
atttactcacgacgtgacgaaccttcagttgctgaacctgtagaagaatatgattatgaa
gatctgaaacaaccttccaactccatttcaagccatcagctaagtgaaattgatcaagct
cgtctttactcatgccttgatcacatgagagaggtgcttggagatgctgtgccagatgaa
atactgattgaagcggtactgaaaaataagtttgatgtacagaaggctttgtcagtggtt
ctagaacaagataacctgcagaatttgaaggacgagagtgatggagtagtatcttcagga
aagacagcaaaaggagtcttattttcttcctctgaaatttcagccgaaaatactcaaaat
tcttactttcaatcaggaaagcatttgaattgcagtagcaaatcctttgatttttctagt
tcagtagcaaaatatggattgtatcataagcctttagtggtaccaagtcactgtttaccc
cacagaaaacagaaacttgaaagaccccaaagtgaaaagaaactagaatcatgtaagtta
acaagagagctttcagtagctgacttaattcataatataccaagagattcgtgcacaagt
cagccatcagtcagattatcatccaaagatagtttggaaaatctgctttcgaaaaatcca
catgctaatttgttgagccatcaagtattggattgtgtttccaaagatgattctgcattc
agaggaataccagacttagagtcattaatgataaagaacgcacgacctaataactcaaat
aatttgccacctgatttccaaaacattccagaacaaagcaatttggcaagtttaaataat
catatacagttaactagctcattggaaaatatgactcttgataatctaaatactgataaa
gaggttgaacttggaagtatttctttggttgggccaagtgccaagaatcacattttaaaa
aaggacagttcacagttgtcccagcgtggaagtacatccctggctgaactgtttcaggaa
catcaagagaccagtccaagtcaatgtttaactttatctgatctttgtagccagcattca
tcttccagtttctcagatttaagtttgggatcctttcccctgtcacagttggcaaaccac
tgtcagtcttcaactgaaatatcagagttatcaggatctctgtcatctttggcatttcat
aaaacttctcccacaagagaccttgagaatttgtcgctttctgatttgattgcagagaca
attgctgtagacagctctcagattaagaaagattctttggagcgaagttcatctgaaatg
aagtctcctgggatagattcaaatattgatcttagtgtccttataaaaacatcagatttt
gttccaaagcctgtggtagatgaattagttcctccaacatcaggaactaaagttttaagt
tcaagggtagggaaaaattccagttccattaaggatattaagaaaaacaaaaaaggctct
ctgagtagaagaacaccattttctgtttcttggaccaaggcccttgctgctagaccttca
gcttttgcttcaacactgtgtcttcgttacccactgaaaggccacaagcgacgtgccatt
gacctctacaagacttttctttacagtagacaggtccaggatgtaaaggacaaagaaata
agtcctctggtagcaataacaccatttgacttcaaatcaccatctcctgatgacattgta
aaagctcatcaaaagcaagcatttactagagaatag
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