Ochotona princeps (American pika): 118758092
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Entry
118758092 CDS
T07609
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-3-like
KO
K06240
laminin, alpha 3/5
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04151
PI3K-Akt signaling pathway
opi04382
Cornified envelope formation
opi04510
Focal adhesion
opi04512
ECM-receptor interaction
opi05145
Toxoplasmosis
opi05146
Amoebiasis
opi05165
Human papillomavirus infection
opi05200
Pathways in cancer
opi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118758092
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118758092
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118758092
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118758092
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118758092
09162 Cancer: specific types
05222 Small cell lung cancer
118758092
09172 Infectious disease: viral
05165 Human papillomavirus infection
118758092
09174 Infectious disease: parasitic
05146 Amoebiasis
118758092
05145 Toxoplasmosis
118758092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
Laminin_B
EGF_LMN_ATRN
HECW1_helix
Motif
Other DBs
NCBI-GeneID:
118758092
NCBI-ProteinID:
XP_036349407
LinkDB
All DBs
Position
9:complement(40827647..40979562)
Genome browser
AA seq
1798 aa
AA seq
DB search
MRFRPWLRCRHLAGSGSLGTPLSVPALKARSAPGACRDNSGWPEAGRCQLLIARLVVPAA
ARSGAEKPPPRGALHAGSPSAGGCCRRALCSGMATAAGVQARAPRPLRLLLLLLPVLPAW
CATAWDTGATPRRSLDPPYFNLAEAARIWATATCGERGKGDGGGRPTPELYCKLVGGPTA
QGSGHTIQGQFCDYCNSEDPRKAHPATNAIDGSERWWQSPPLSSGTQFNRVNLTLDLGQL
FQVAYVLIKFANSPRPDLWVLERSVDFGNTYSPWQYFAHSKRDCLEQFGKEANTGLTRDD
DVLCTTDYSRIVPLENGEVVVSLINGRPGAKNFTFSPTLREFTKATNIRLRFLRTNTLLG
HLISKAQRDPTVTRRYYYSIKDISIGGRCVCNGHAEVCNVNNSEELFRCECQHHTCGETC
DRCCMGYNQKRWQPAAWEQSNECEACNCHGHADDCYYDSDVEQQQASLNIQGVYAGGGVC
INCQHNTAGINCEKCAKGYYRPFGVPVDAPHGCIPCSCDPERADGCEQGSGRCHCKANFH
GDHCEKCADGYYNFPLCLRNPSFSTPVSNPEDPVAGDIKGCDCDLEGVLPEICDAQGRCL
CRPGVEGPRCDACRSGFFSFPICVACQCSALGSYPTPCNAETGQCECQPGITGQWCDRCL
SGAYDFPHCQGSSGACDPAGTSDSGFDYCQCKLHVESPTCSICKPLYWNLVQENPHGCSE
CQCHEAGTASGIGECGQGDGDCYCKLHVTGDACDTCEDGYFALDKSNYFGCQGCQCDIGG
ALTTMCSGPSGACQCRQHVVGKACQRPAKNHYFPDLHHMKYEIEEGTTPDGGALRFGFDP
LMFPEFSWRGYTQMTSVQNEVQMMLNVDKSNLSLFHIILRYINPEREATSGRIRIYPSWD
KGDAAQSKEIIFLPSKEPTFVTIPGNGLADPFSMSPGTWIACIKAEGVLLDYLVLLPRDY
YEAPVLQLPVTDPCATAGSPHKNCLLYQHLPVTRFPCTFACEARHFLLDGEPRPLAVRQP
TPAHPVMVDLSGRQVELHLRLRVPRVGPYVVVIEYVTEGDQLVVVDVSMESPGAVVVGQV
NIYSCKYSVPCRSAVTDGLGRLAVWELLEDADVQLKAHMAQLLLHQICIIPIEEFSTEYL
RPQVHCIASYGPFGNQSATCISLAHETPPTALTLDVPGGGPLPHPPWGLSQSAGVTQGLN
LKAPQNQVTLRGLVPRRGRYVLVIHFCQVKHPVFPAQVFVHGGQPWSGSFSASFCPHVLG
CRDQVIADGQVEFDLSEPEVAVTVKVPEGKSLVLVRVLVVPAENYDYQILHKNSVDKSFE
FVTHCGRNSFYIDPQMASAFCKSSARSLVAFYHNGALPCECHPTGAISTRCSPEGGSAHA
EPTSLGGSVPAVPQAXYGFPHCKRKSCNCGQRLCEETTGQCLCPPHTVKPQCEVCETHSF
SFHPLVGCESCNCSTRGTVGAASLECDKDSGQCRCKPRVTGRQCDRCIAGFYHFPECVPC
SCNQDGMEPGVCDPQTGACLCKENVEGTECNMCREGSFYLDPANPKGCTSCFCFGVSNHC
HSTHKRRSKFVDMLGWRLETAEGGDVPVSFNPGSNSVVVDLQELPATVRSASWVAPPSYL
GDKVSSYGGFLTYQAKSFGLPGDMVLLEKRPDVQLTGQHMSLVHKESSPPRPDRLHQGRV
QVVEGNFRHAGSGAPVSREELMMVLSRLDGLRIRGLYFTETQRLTLGEVGLEEASDSGSG
RRAHHVEMCACPPDYAGDSCQPDQNSQPKKKEESRDDPPHTQGVYLAVTQPVIYSGSS
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttcgtccctggctccgctgccgccaccttgctggaagtgggagcctgggaacg
cctctctcagtccccgccctcaaagctcgcagtgcgcccggtgcctgcagagacaactca
ggctggcccgaggccgggcgctgtcagctcctgatcgcccggctggtggtcccggctgcg
gcacgctccggagcagagaagccgcccccacgtggcgcgctccacgcggggagtccctcg
gccggaggctgctgcaggcgggccctgtgcagcgggatggcaactgccgcgggtgtgcaa
gccagggcacctcggccactccggttgctgctgcttctattaccggtgctgcccgcttgg
tgtgctaccgcttgggacacgggagccacgccacggcgcagcttggatccgccttatttc
aacctggccgaggcggcgaggatttgggccacggccacctgtggggagcgcggaaagggc
gacggtggtgggcgaccgacgcccgagctctactgcaagttggtagggggtcccacagcc
cagggtagcggccacaccatccagggtcaattctgtgactactgcaattccgaggacccc
aggaaggcccacccggccaccaatgccatcgacggttctgagcgctggtggcaaagcccc
cctctctcctcgggcacacagttcaacagagtcaacctcaccctagacctgggtcagctc
tttcaagtggcctatgtcttaatcaaattcgcaaattctcctcgtcctgatctctgggtc
ttggaaagatctgtggactttggaaacacatactcaccttggcaatattttgctcattct
aagagagactgtttggaacaatttggaaaggaggcaaatacaggtctcacccgggacgat
gatgtactctgtacgacagactattcccgaatcgtgcctttggaaaacggtgaggttgtg
gtgtccttgataaatggtcgtccaggagcaaaaaattttactttctctcccaccctgcgg
gagttcactaaggccacaaacatccggctgcgtttccttcgaaccaacacccttctcgga
cacctcatctccaaagcccagcgggatcccacagtcacgaggcggtattactacagcata
aaggatatcagcattggtgggcgctgtgtttgcaatggccatgctgaagtttgcaatgta
aataattctgaagaattgttccggtgtgaatgccagcaccacacctgtggggagacgtgt
gatcgctgctgcatgggatacaaccagaagcgctggcagccggctgcttgggagcagagc
aatgagtgtgaagcctgtaactgccacggccatgctgatgactgctactatgactctgat
gttgagcagcagcaggcgagcctgaatattcaaggtgtctatgcaggtggaggggtctgc
attaattgtcagcacaacacagctggtataaactgtgaaaagtgtgccaaaggttactac
cgcccttttggggttccagttgatgccccccatggctgcatcccttgcagctgtgaccct
gagcgagcagacggctgtgaacagggctcaggccgctgtcactgcaaggcgaatttccac
ggagatcactgcgagaagtgtgctgatggctactataatttcccactttgtttgagaaat
cccagtttttccactcctgtttcaaatccagaagatccagttgctggggatataaaaggg
tgtgactgtgacttggaaggtgttctccccgaaatctgtgatgcccagggaaggtgcctg
tgccgccctggggtggagggccctcggtgtgatgcctgccgctctggtttcttctccttc
cccatctgcgtagcctgccagtgttccgcgcttggatcctacccaacaccctgcaatgca
gagaccggccagtgtgaatgccagccggggattacgggacagtggtgtgacaggtgtctc
tctggagcctatgacttcccccactgccaaggttccagtggtgcctgtgacccagccggg
accagtgactctggttttgattattgccagtgcaagcttcatgttgaaagccctacttgt
agcatctgcaagccattgtattggaacctggtccaagaaaaccctcacggatgttcagaa
tgccaatgccatgaggcgggaacagccagtggaattggagagtgtgggcagggagatggt
gactgttactgcaagctccatgtgactggggatgcctgtgacacctgtgaggatggatat
ttcgctttggacaagagcaattactttgggtgtcaagggtgccaatgtgacattggcggg
gcactcaccaccatgtgcagtgggccctccggagcatgccagtgccgccagcatgttgtg
gggaaggcgtgccagcgtcctgcaaagaatcactatttcccggatctgcatcacatgaag
tatgagattgaagaaggcaccacgcccgatgggggagcccttcggtttggatttgatccc
ctgatgtttcctgagtttagctggagaggctatacccagatgacatcggtgcagaatgaa
gtacagatgatgttgaatgtggacaagtccaatctctctttgtttcatattattctgaga
tacattaatcctgaacgtgaagcaacatctggtcgcataaggatctacccatcctgggat
aaaggagatgctgctcaaagcaaagagatcatcttcctgccaagtaaggaacccacattt
gtcaccatccctggcaatggccttgcagacccattttcaatgtcaccagggacctggatt
gcttgcattaaggcagaaggagttctcttggattacctggtgctgctccccagggactac
tacgaagcacctgtgctgcagctgcctgtcacggacccgtgtgccacggcaggatcaccc
cataagaattgcctgctttaccagcatctgccagtgaccagattcccctgcacattcgct
tgtgaggccagacacttcctgctggatggggagccaagaccgttggcagtgaggcagccc
acccctgcacacccagtcatggtggacctcagtgggagacaggtggaactgcacctgcgg
ctgcgcgtcccacgggttgggccctatgtggttgtgattgagtatgtcactgaaggagac
cagctggttgtggtggatgtgagcatggagagccctggtgctgttgtggtgggccaggtg
aacatctacagctgcaagtacagtgttccgtgccggagtgccgtgacggatggcctgggc
cgcctggctgtgtgggagctgctggaagacgcggacgttcagctcaaggcgcacatggcc
cagctcctcctgcatcaaatttgtatcatacccattgaggaattctccacagagtacctg
agacctcaagttcactgcattgccagttatggaccctttggcaatcaaagtgccacctgc
atctccctggcccatgaaactcctccaacagccttgactttggatgtcccaggtggaggg
cctctccctcatccaccctggggtctttcccagtctgcaggtgttacccaaggactcaat
ctgaaggcaccacagaaccaagtgactctgagaggacttgtgccacgcaggggccggtac
gtccttgtcatccatttttgtcaagtcaagcacccagtgtttcctgctcaggtgtttgtg
catggagggcaaccctggtctggctccttcagtgcctccttttgcccccatgtgcttggc
tgccgggaccaagtgatcgctgacggccaggtggagtttgacctctcggagcctgaagtt
gctgttactgtgaaggttccagaagggaagtccttagtgctggtccgtgttctagtggtg
cctgcagagaattatgactaccaaatacttcacaaaaattcagtggacaagtcctttgag
tttgtcacccattgtggaagaaacagcttttatattgatccgcagatggcctctgcattc
tgtaagagctctgccaggtccctggtggccttttaccataatggtgcactgccttgtgag
tgccatcccaccggggccatcagtacccgctgcagccccgagggtggcagtgcccatgcc
gagccaacgtcattgggcggcagtgtacccgctgtgccacaggctnactacggattccca
cactgcaaacgtaagtcatgcaactgcggccagcgcctgtgtgaagagacaacggggcag
tgtctttgccctccacacacagtcaagccccaatgtgaggtgtgtgagactcattccttc
agcttccaccccctggtcggttgtgagagctgcaactgttccaccaggggcaccgtgggt
gctgcctccctggagtgcgacaaggacagcggccagtgcagatgcaagcccagagtcaca
gggcggcagtgtgaccggtgtattgctgggttttaccacttcccagagtgtgttccatgc
agctgcaaccaagatgggatggagccaggagtatgtgacccacagacgggagcttgcctc
tgcaaggaaaatgtggaaggtacagaatgtaatatgtgtcgagaaggatcattctatttg
gacccagccaatcccaagggttgcaccagttgcttttgctttggagtaagcaatcattgt
catagtacgcataagcgaagatccaagtttgtggatatgctgggctggcgcctggagacg
gcagagggaggagatgtgcctgtctccttcaaccctggcagcaacagtgtggttgtggat
cttcaggagctgcctgccacagtccgcagtgcatcctgggtggcgcccccttcctaccta
ggggacaaggtttcctcctacggaggcttcctcacttaccaagccaagtcctttggtttg
cctggagacatggttcttctggaaaagaggccggacgtgcaactcacaggtcagcacatg
tcccttgttcataaggagtccagtccgccccggccagaccggctacatcagggccgagtc
caggtggttgagggaaacttccgacatgcaggcagtggcgccccagtgtccagagaggag
ctgatgatggtgctgtctcggttggatggactgcgcatccgaggcctctacttcacagag
acgcagcggctcacgctgggtgaggtggggctggaggaagcctccgactcaggaagtgga
cgcagggcacatcacgttgagatgtgtgcctgccctcctgactacgcaggtgactcatgt
cagcctgatcaaaattcacagcccaagaaaaaagaagagagccgggatgacccccctcac
acccagggcgtgtacttggctgtgactcagcctgtgatttacagcggctctagctga
DBGET
integrated database retrieval system
