Brucella pseudogrignonensis: A8A54_06635
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Entry
A8A54_06635 CDS
T04415
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ops
Brucella pseudogrignonensis
Pathway
ops03030
DNA replication
ops03410
Base excision repair
ops03420
Nucleotide excision repair
ops03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ops00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A8A54_06635
03410 Base excision repair
A8A54_06635
03420 Nucleotide excision repair
A8A54_06635
03430 Mismatch repair
A8A54_06635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ops03032
]
A8A54_06635
03400 DNA repair and recombination proteins [BR:
ops03400
]
A8A54_06635
Enzymes [BR:
ops01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A8A54_06635
DNA replication proteins [BR:
ops03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A8A54_06635
DNA repair and recombination proteins [BR:
ops03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A8A54_06635
NER (nucleotide excision repair)
GGR (global genome repair) factors
A8A54_06635
MMR (mismatch excision repair)
DNA ligase
A8A54_06635
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A8A54_06635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
ANG98398
LinkDB
All DBs
Position
1:complement(1374720..1376882)
Genome browser
AA seq
720 aa
AA seq
DB search
MSDISIEKLTDLEAAAELERLAREIAHHDELYHANDRPEISDADYDALKRRNDAIEERFP
HLVRADSPSVRVGTAPVSKFAQVVHARPMLSLGNAFSDEDMQDFVGSVYRFLGQLPDNSI
AFTAEPKIDGLSMSIRYENGVLVSAATRGDGTTGENVTANIRTISEIPNKLPAGVPAVVE
VRGEVYMAKSDFLALNEQMVAEGKQTYVNPRNTAAGSLRQLDAKVTASRKLRFFAYAWGE
MSEMPSDTQHGMVEVFREWGFPVNPLTKRLQSADELIAHYRAIGLERAKLDYDIDGVVYK
VDRLDLQTRLGFRSRSPRWAIAHKFPAEQATTILRGIDIQVGRTGALTPVARLEPITVGG
VVVTNATLHNEDYIKGIGLKGERIREEDHDIRIGDTVIVQRAGDVIPQIVDVVLEKRPAD
AVPFHFPHECPVCGSHAVREEGEAVYRCTGGLTCAAQAVERIRHFVSRNAFDIEGLGEKQ
VEFFFHAEDDNLKIKSPADIFTLQKRQANSPLKKLENIEGFGATSVKKLYDAINDRREIA
LHRFLFGLGIRHVGEVNAKRFAKAYLTYDKFAEAATTAIPPKEGDRSDKGNEAWQDLIAV
EGIGGIVAEAVVDFYAEPHNREVLKELLDEVTPLDEVARVATGSPVEGKTVVFTGSLERM
SRDEAKAMAERHGAKTAGSVSKKTDLVVAGPGAGSKLAKASELGIEVIDEDAWLTLVGEG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatttccattgaaaaactgaccgaccttgaagccgctgcagaactggagcgg
ctggcgcgtgaaattgctcatcatgatgagttgtatcatgccaatgaccggccggagatt
tcggacgcagactatgatgcgctgaagcggcgtaatgatgccattgaagagcgttttccg
catctcgtacgggccgacagtccttctgtgcgcgttggcacggcaccagtttccaaattc
gcacaggttgtccatgcgcgtccgatgctttcgctcggcaacgcgttttcggatgaagat
atgcaggatttcgtcggcagcgtatatcgctttctcgggcaactgccggataattccatt
gctttcacagctgaaccgaagatcgacgggctatccatgtcgatccgttatgaaaacggg
gttctcgttagtgccgctacgcggggtgatggcacgaccggcgaaaatgtaaccgccaat
atccgaaccatcagtgagattccaaataagcttccagcaggtgttccagcggtcgtcgaa
gtgcgcggcgaggtctatatggccaagagcgacttcctcgcgctcaacgagcagatggtg
gcagaaggcaagcaaacatatgtcaacccgcgcaacaccgcagcaggctcgctgagacag
cttgatgcgaaagtgacggccagccgcaagctcaggttctttgcctatgcctggggtgag
atgtctgaaatgccatctgatacacagcatggcatggtggaggtattccgcgaatggggc
ttcccggtcaatccgctgacaaagcggttacagagcgcagatgagcttattgcgcattat
cgggcgattgggcttgagcgtgccaagctcgattacgatatcgacggcgttgtctacaaa
gtggaccggctggacctgcaaacacggcttggattccgctcgcgtagcccgcgctgggct
atcgcacacaagttcccggcagagcaggcaaccacaattctgcgcggcattgatattcag
gttggacgtacgggcgcgctgacgccggttgcacgccttgagccgattactgttggcggc
gtggttgtcaccaatgccacgctgcacaatgaagattacatcaagggcataggcctcaag
ggtgaacgcatccgtgaggaagatcacgacattcgcatcggcgatacggtgatcgtgcag
cgtgcaggcgatgtcattccgcagattgtagatgtggtgctggaaaagcgccctgctgat
gctgtgccgtttcatttcccgcatgaatgcccggtttgtggcagtcatgccgtgcgcgaa
gaaggtgaggcggtctatcgctgcacaggtggtttgacctgtgccgcacaggctgtagag
cgcatccgtcatttcgtatcgcgcaacgcgttcgacattgaaggtctcggcgaaaagcag
gttgagtttttcttccatgcggaagatgacaacctgaaaatcaaatcacctgcggatatt
ttcacgttgcagaagagacaggcgaattcgccgctcaagaagctcgagaatattgagggc
tttggtgcgacttccgtgaagaagctctatgacgcaatcaatgaccggcgcgagattgct
ttgcatcgcttcctgttcggtcttggtatccgccatgttggtgaagtgaacgccaagcga
tttgccaaggcttatctcacctacgacaagtttgccgaagcagcaacaacggctatccca
ccaaaagagggcgaccgtagcgacaagggcaacgaagcctggcaggatctgattgcggtt
gaaggcattggcggcattgtggccgaagccgtggtcgatttttatgccgaaccgcataat
cgggaagttctgaaagaactacttgatgaggtgacaccgctcgatgaagttgcacgcgtg
gcaactgggtcgccggttgaaggcaagacagttgtgttcacgggcagcctcgaacgcatg
tcgcgtgatgaagccaaggcaatggccgagcgtcatggtgccaagactgcgggttctgtt
tccaagaaaactgatcttgtggtggctggtcctggtgcagggtcgaagcttgcaaaagca
tcggaacttggcatcgaagtgatcgacgaagatgcgtggctgaccttggttggagaaggc
tga
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