Zophobihabitans entericus: IPMB12_01355
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Entry
IPMB12_01355 CDS
T06493
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
orb
Zophobihabitans entericus
Pathway
orb00270
Cysteine and methionine metabolism
orb00450
Selenocompound metabolism
orb00670
One carbon pool by folate
orb01100
Metabolic pathways
orb01110
Biosynthesis of secondary metabolites
orb01230
Biosynthesis of amino acids
orb04981
Folate transport and metabolism
Module
orb_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
IPMB12_01355 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
IPMB12_01355 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IPMB12_01355 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IPMB12_01355 (metH)
04980 Cobalamin transport and metabolism
IPMB12_01355 (metH)
Enzymes [BR:
orb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
IPMB12_01355 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QIQ20442
UniProt:
A0A6G9I9D7
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All DBs
Position
complement(291302..294991)
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AA seq
1229 aa
AA seq
DB search
MSKYQAQLKCVEQLKSQLKQRILILDGAMGTMIQRYKLQEQDYRGERFADWSCDVKGNND
LLVLTQPLLIKDVHDAYFAAGADIVETNTFNATSIAMADYEMQSLVHEINYAGAQIARAC
ADEWTAKTPDKPRYVAGILGPTNRTASISPDVNDPAKRNVNFNQLVSAYQEATKALIAGG
VDIIMVETIFDTLNAKAALFAVESVFDELGVTLPIMISGTITDASGRTLSGQTTEAFYNS
LRHVQPLSFGLNCALGPDELRQYVAELSRISEFAISVHPNAGLPNAFGGYDLEAKEMATQ
IAEWARAGFLNIVGGCCGTTPEHIAAIAKAVDGIAPRQAPVLEKVCRLSGLEPFNISKGH
LFVNVGERANVTGSARFKRLIKEEKYNEALDVAREQVENGAQIIDINMDEGMLDAEAAMV
RYLNLIAGEPDIAKVPIMIDSSKWEVIEKGLQCIQGKGIVNSISMKEGVDKFIQQAKLVR
RYGAAVVVMAFDEQGQADTRARKIEICRRAYQILTQEVGFPPEDIIFDPNIFAVATGIEE
HNNYAVDFIEACADIKRELPYAMISGGVSNVSFSFRGNEPVREAIHAVFLYHAIHNGMDM
GIVNAGQLAIYDDLPAELKTAVEDVILNKHPEGTENLLAIAEKYRGTKTEQEGDKQQAEW
RSYTVEKRLEYALVKGITEFIELDTEEARQKAEKPLEVIEGPLMAGMNTVGDLFSEGKMF
LPQVVKSARVMKQAVAYLEPYIQASKQQGKAAGKVLIATVKGDVHDIGKNIVAVVMQCNN
YEVIDLGVMVPCEKILSTAKEHNVDIIGLSGLITPSLDEMVHVAKEMERQGFKLPLLIGG
ATTSKAHTAVKIEPNYSGPVVYVQNASRNVAVCSALLSDTQRDDYVTRLRAEYQTVREQH
GRKKSRTPAVTLAQARANAWQIAGDYQPPKPNQLGVQEVQADIAMLRHYIDWTPFFMTWG
LHGKYPTILQHAEVGEEAQKIFNEANAMLDELSLNKALKPKGIMGLFPAKRVGDDVILYR
DEARQEQLLVTHHLRQQTEKEQFSNYCLADFVAEQNDYMGAFAVTGGLEEHDLAAAYNDK
GDDYNKIMVTAVSDRLAEAFAEYLHEKVRKEIWGYAPDENLSNDERIRENYQGIRPAPGY
AACPEHTEKQAIWDLLDVERRIGMKLTTSYAMWPGASVSGWYFSHPDSKYFAVGKIQKDQ
IVDYANRKGMTVSEVERWLAPNLDYDPEE
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaaatatcaagcccagcttaagtgtgtagaacaattaaaatcacagctaaaacaa
cgaattctgattcttgatggtgccatgggtacgatgatccagcgctataaattgcaggag
caggattaccgcggtgagcgctttgctgactggtcttgcgatgttaaaggcaataatgat
ttactggtactgacgcaaccgctgctgattaaagatgtgcatgatgcttattttgctgcc
ggcgctgatattgttgaaaccaatacctttaatgctacaagcattgccatggctgactat
gagatgcagtcactggtacacgagattaactatgccggcgcccaaattgcccgggcttgt
gcggatgaatggacagctaaaacacctgacaaaccccgttatgtggcaggtattttaggg
ccgactaaccgtactgcatcaatctcgcctgatgtgaacgatccggcaaaacgtaatgtc
aattttaatcaactggtgagcgcctatcaggaagcaactaaagcacttattgctggcggt
gtggatatcattatggtggaaaccatctttgatactcttaacgccaaagcggcgctgttt
gcggtggaaagtgtctttgatgagctgggtgtcactttaccaattatgatttcaggtacg
attacggatgcatctggccgtacgctttcaggccagacaactgaagcattttataactcg
ttacgtcacgttcagccgctctcttttggtttgaactgtgcgctgggtccagatgagctg
cgtcagtacgtggcggagttgtcacgtatttctgaatttgcgatttctgtgcaccctaat
gccggtttacctaatgcgtttggtggctatgatctggaagccaaagagatggcaacacaa
attgctgagtgggcgcgtgctggcttcttaaatattgtaggtggctgctgtggtaccaca
ccagaacatattgcggcgattgcgaaagcggttgatggcatagctccaagacaagcgccg
gtacttgaaaaagtctgccgtttatcaggacttgagccttttaatatcagtaaaggccat
ctgtttgtgaacgtgggtgagcgcgctaacgtgaccggttctgcccgctttaaacgtctg
attaaagaagaaaagtataacgaagcacttgatgtggctcgtgagcaggtagaaaacggt
gcacagattatcgatatcaatatggatgagggcatgcttgatgctgaagctgccatggtt
cgttatctgaacttaatcgctggtgagcccgatattgctaaagttccaattatgatcgac
tcttccaagtgggaagtgatcgaaaaagggctacaatgcattcagggtaagggtattgtt
aactctatctcgatgaaagaaggtgttgataagtttattcaacaggcaaaactggtgcgt
cgctacggtgctgcggttgtcgtgatggcgtttgatgaacaggggcaagctgatacccgt
gcacgtaaaatcgagatctgtcgtcgtgcttatcagattttgacgcaggaagtgggtttt
ccaccagaagatatcatttttgacccaaatatttttgcggtagccaccgggatcgaagag
cacaacaactacgcggtcgattttattgaagcgtgtgctgatattaagcgtgagttgcct
tatgccatgatctctggtggtgtatctaacgtctccttctcgttccgtggtaatgaaccg
gtgcgtgaggcgatccatgcggtatttttatatcatgccattcataatggtatggatatg
ggtattgtcaatgccggtcagctggctatctatgatgacttgcccgcggagcttaaaact
gccgttgaagatgttatcttaaataaacacccggaaggaacagaaaatctgctggcgatt
gctgaaaagtatcgaggtactaaaacggaacaggaaggcgataaacagcaggcagaatgg
cgtagttatacggttgaaaaaagacttgaatatgcgctggtgaaaggtattaccgagttt
attgagctggatacagaagaagcgcgtcaaaaagcagaaaagccactggaagtgattgaa
ggcccgcttatggccggtatgaatacggtaggagatctgttttctgaagggaagatgttc
ctgccacaagtggtaaaatcagcacgggttatgaagcaagctgtggcttatttagagcct
tatattcaggccagcaaacagcaaggtaaagcggccggtaaagtgctgattgccacagtc
aaaggcgatgtgcatgatattggtaaaaatattgtggccgttgtgatgcagtgtaataac
tatgaagtcatcgatctgggtgtgatggtgccttgtgaaaagatccttagtacggcaaaa
gagcataatgttgacatcatcggtttgtcaggactgatcacaccgtcgctggatgaaatg
gtgcatgttgctaaagagatggaacgacaaggttttaaattaccactattgattggtgga
gcaaccacgtctaaagcgcataccgcagtgaaaattgagccaaattacagtggtccagtg
gtttatgtgcaaaatgcctcacgtaacgttgctgtgtgttctgcactgctttctgatacc
caaagagatgattatgtgacacgcctgcgggcagaatatcaaaccgtgcgtgagcagcac
gggcgtaagaaatcacgcacaccagccgttaccttagcacaagcgcgtgctaatgcgtgg
cagattgccggtgattatcagccgccaaagccaaatcagttaggcgtgcaggaagtgcag
gcagatattgccatgttgcgccactatatcgactggacacctttctttatgacgtgggga
ctacatggtaagtacccgaccattttacagcacgctgaagtaggcgaagaagcgcaaaaa
atctttaatgaagcgaatgccatgcttgatgaattaagtctcaacaaagcacttaaacca
aaaggtattatgggactgttcccggctaaacgtgtgggtgatgatgtaattttgtatcgt
gatgaggctcgtcaggaacagttactggtcacgcaccatctgcgtcaacaaactgaaaaa
gagcaatttagtaattactgtttagccgattttgtcgcagaacaaaatgattatatgggg
gcttttgcagtcactggcgggctggaagaacatgatctggcggcagcctacaatgataaa
ggtgatgattataataagatcatggtcactgcggtctccgatcgtttagcagaagccttt
gctgaatatctgcatgaaaaagtccgtaaagaaatttggggttatgcgccagatgagaat
ctgtctaatgatgagcgaattcgtgagaactatcagggtattcgccctgctccgggttat
gcggcgtgccctgaacatacggaaaaacaagcgatttgggacttgcttgatgttgagcgt
cgtattggtatgaagctaaccacttcttatgcaatgtggccgggggcgtctgtttctggc
tggtattttagtcacccggacagtaaatattttgccgtgggtaaaatccaaaaagaccaa
atcgttgattatgcaaatcgtaaaggtatgacagtgagtgaagttgagcgctggctggca
ccaaatcttgattatgatccggaagagtaa
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