Zophobihabitans entericus: IPMB12_05560
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Entry
IPMB12_05560 CDS
T06493
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
orb
Zophobihabitans entericus
Pathway
orb01501
beta-Lactam resistance
orb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IPMB12_05560
01503 Cationic antimicrobial peptide (CAMP) resistance
IPMB12_05560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
orb02000
]
IPMB12_05560
01504 Antimicrobial resistance genes [BR:
orb01504
]
IPMB12_05560
Transporters [BR:
orb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IPMB12_05560
Antimicrobial resistance genes [BR:
orb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IPMB12_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QIQ21192
UniProt:
A0A6G9IBI7
LinkDB
All DBs
Position
complement(1236585..1239800)
Genome browser
AA seq
1071 aa
AA seq
DB search
MAKFFIDRPVFAWVIAIMMMLGGALAIKLLPIEQYPDIAPPAVTVTAVYPGADAETIENT
VTQLIEQNLTGIDNLIYMKSSSSSAGLVQTTLTFAPGTNPDVAQVQVLNKVEGIKSRLPE
SVQKNGVSVAKNNNNFLKVVAFYSTNPEKTQADIADFIYSTVQDPVRRVQGVGDTQLFGS
EYAMRIWLDPHKLTYYKLSTSEITAAIQAQNAQVTAGQLGAYPATEGQELNATITAQSRL
KTAEEFQNILVRVNQDGSKVLLQDVAKVELGAEGYGFVSRFNGYTSSGLGIYLATGANQL
ETSTAVDKKIEELSAIFPDDIRYKFPYDTTPFVTLSIENVVQTLFEAIILVVLVMYVFLQ
NFRSTLIPTITVPVVLLGTFAVLYICGFTINTLSMFAMVLAIGLLVDDAIVVIENVERIM
HEEGLPPREATIKSMEQITSALVGIAVVLSAVFVPMAFYGGAAGGIYRQFSISIVTAMTL
SVVIAIVLTPALCATILKAPSKFTTKPKQTAFEKLATVPPFTWLGKAKKGFFNWFNRTFD
RSVKVYEKGVIKVIKHPIISFGAYLLICFALIFGFNRLPTGFLPAEDQGVLILMAELPPG
STLSQTQDVLNRASDYFRENEKDAIEEIFTVAGFGMGGRGQNMALGFIKLKDWNERPGSD
MKVDAIVGRANGFLSSIREGRIFATNIPSVPSLGMANGFSFMLKDAGGKGHAELMTAFYQ
MLGMAAQNPNLMQVRPSGMLDVPQYKINVDFETAQALGVSLSSINSTLSTALGSSYIDDF
VYNNRVKKVYVQADAPYRMLPDDFSFWHVKNSQGEMVPFDSFATTSKTFGSPSLVRYDGV
SAMGISGSAVPGQSSGQAMAIMEQLTKNLPTGFSFDWTDISYQERQTGSQTTTLYIISLI
VVFLSLAALYESWSIPISVLFVIPLGIFGTVYATMFASLENDIYFIVGLLTTMGLAAKNA
ILIVEFAKDALEKEGKTLIDATLEACRLRLRPILMTSFAFILGVLPLALSSGAGSASQNA
VGTGVIGGMLTATFLAIYFVPLFFVFVTKVFTKHKHRAVMSKPSKTTPVAE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttttttatcgatcgccctgtttttgcttgggtaattgctattatgatgatg
ctcgggggtgcgctggctattaagctgctgccaatcgagcaatatccagatatagcacca
ccagcagtaacagtaactgcggtatatccgggtgcggatgccgaaaccattgaaaataca
gtaacacagctaattgagcaaaacttaactggtattgataacttaatttatatgaaatca
tccagtagttctgcaggtttagtacaaaccaccctaacctttgccccaggtacaaacccg
gacgttgctcaggtacaggtgttaaataaagttgaagggattaaatcgcgtttacctgaa
agtgttcaaaaaaacggtgtatcagttgctaagaataacaataacttcttaaaagttgtg
gcattctactcaactaacccggaaaaaacacaagcagatatcgcagactttatttactca
acagtacaagacccggttcgtcgtgtgcaaggtgtaggtgatactcaattattcggttct
gaatatgcgatgcgtatctggttagatccacataagttaacctattacaaattatctact
tctgaaattacagctgcaatacaagcacaaaacgcgcaggtaactgcgggtcagcttggt
gcctaccctgcaactgaaggtcaggagttaaatgcgacaatcactgctcagtctcgttta
aaaacagctgaagagttccaaaacattcttgttcgtgtaaatcaggatggttctaaagtt
ttactacaagatgttgctaaagtagaacttggtgcagaaggttatggattcgtatctcgc
tttaatggttatacctcatcaggtcttggtatttaccttgccacaggtgctaaccagtta
gagacatcgacggctgttgataagaaaatcgaagaattatctgcgattttccctgacgat
atccgttataaattcccttatgacacaacgccattcgttacattatcaattgagaacgta
gtacaaacactatttgaagcaattatccttgttgttttagttatgtacgtgttcttacag
aacttccgttcaacattgataccaacgattacggttccggttgtattactgggtactttc
gcagttctttatatttgtggatttaccattaatactctttccatgttcgccatggttctg
gccatcgggcttctggtggatgacgccatcgttgttatcgagaacgtggagcggatcatg
catgaggaaggacttcctcctcgtgaagcgaccattaaatcgatggaacagatcacttct
gcattagtcggtattgcggtcgtcttatctgcagtattcgtaccgatggcattctatggt
ggtgcggctggtggtatttatcgtcagttctcaatctcaatcgtaacggcgatgacctta
tcagttgtgatcgcgattgtgttaacaccagcattatgtgcgacaattttaaaagctcca
tcgaaatttaccactaaaccaaaacaaactgcatttgagaaacttgctaccgttccacca
tttacctggcttgggaaagcgaaaaaaggcttctttaactggtttaaccgtacctttgat
cgtagtgtaaaagtctatgaaaaaggtgtaattaaagttattaaacatccaattattagc
tttggtgcgtacttacttatctgctttgcgttgatttttggtttcaaccgtctacctacc
ggcttcttaccggcagaggatcagggtgtactcattttgatggcagagttaccgccaggt
tcaaccttatcacaaactcaggatgtgctaaacagagcttctgactacttccgtgaaaac
gaaaaagatgcgattgaagagatatttaccgttgctggctttggtatgggtggtcgtggt
caaaacatggcactaggctttatcaagttaaaagactggaatgagcgcccgggttcagat
atgaaagtggatgcaattgtgggtcgagctaacggattcttatcttcaatccgtgaaggc
cgtatctttgcaacaaatatcccttctgtaccatcacttggtatggcaaacggcttctcc
tttatgctaaaagatgccggtggtaaaggacatgctgaattaatgacagctttctaccaa
atgttaggtatggcggcacaaaatccaaacttaatgcaggttcgcccatctggtatgctt
gatgttccacaatacaaaattaatgtggacttcgaaacagcccaggctttaggtgtctct
ttaagttctattaactcaacgttatcaacggcacttggttcatcttatatcgatgacttc
gtgtataacaaccgggttaaaaaagtatacgtacaggctgacgctccttatcgtatgtta
ccagatgactttagcttctggcatgttaagaacagtcagggtgaaatggtgccatttgat
tcatttgcaacaacatctaaaacctttggttcaccatcattggttcgttacgacggtgta
tcggcaatggggatcagtggttcagccgttccgggacaaagctctggtcaggcaatggca
atcatggaacagttaaccaaaaatcttcctactggtttctcatttgactggacagatatc
tcttatcaggaacgtcaaacaggttcacaaacgacaacgttatatattatctcattgatc
gtggtgttcttgtcactggcagcactatatgagagctggagtattccaatttcggtactg
tttgttatcccactaggtatctttggtacagtttatgcaaccatgtttgcaagtctggaa
aacgatatctactttatcgtaggtctcttgacgacgatggggctcgccgcgaagaatgcg
atattaatcgtagaatttgctaaagatgcccttgagaaagaaggtaaaacattaattgat
gcaacacttgaagcatgtcgtttacgtctgcgtccaattctgatgacatcatttgccttt
attcttggggtgttaccgctagcattaagtagtggtgcaggttctgccagccaaaatgcg
gtaggtacaggtgtaatcggtggtatgttaacggcgacgttccttgctatctactttgta
ccgttattcttcgtgtttgtaactaaagtatttactaaacacaaacacagagctgtgatg
tcaaaaccatcaaaaacaactccggtagctgaataa
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