Zophobihabitans entericus: IPMB12_08975
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Entry
IPMB12_08975 CDS
T06493
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
orb
Zophobihabitans entericus
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
orb03009
]
IPMB12_08975 (rlmC)
Enzymes [BR:
orb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
IPMB12_08975 (rlmC)
Ribosome biogenesis [BR:
orb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IPMB12_08975 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_31
Methyltransf_15
Methyltransf_25
Methyltransf_ANTKMT
Methyltransf_32
COP9_hel_rpt
Methyltransf_37
Methyltransf_11
N6_N4_Mtase
Methyltransf_12
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QIQ21801
UniProt:
A0A6G9IC42
LinkDB
All DBs
Position
1972610..1973752
Genome browser
AA seq
380 aa
AA seq
DB search
MTIQCDYYAKKQCLSCQWLAKPYTKQIEVKQHNLSDKLKSFHPELILSPVVSELFHFRNK
AKMVVTGTVEKPILGIINHEQQGIDLCHCPLYERGIAETLELLKGFIKKNSLVPYNINKK
KGELKFIILTVHQTKIMLRFVLRSENMVEQIRVVLPELQQLIPNLVVVSANIQPKHAAIL
EGEQEIILTENGVLPVMLNQIPLFIRPQSFFQTNTNVAEKLYQTANEWIDELNCSSQQVQ
SIWDLFCGVGGFGLHCTKPNMRLTGIEINQEAIACAKKSAEQLGLSHTDFRSLDSTAFAL
AQQDIPDLVLVNPPRRGIGKVLAEYLQQVAPKYILYSSCNPDSLGQDLLSLTNYQLNKVQ
LFDMFPHTEHMEVMVLLIKK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgacgatacagtgtgattattatgcaaaaaaacagtgtctatcctgtcagtggttagcg
aagccttacactaaacaaattgaagttaaacaacataatttatcagataaactcaaatct
tttcatcctgaattaattttatcgcctgttgttagtgaactatttcatttccgtaataaa
gccaaaatggttgttaccggaacagtggaaaagccgattttgggtattattaatcatgaa
cagcaaggaattgatctatgccactgtcctttatatgaacgaggtattgctgaaacactt
gaactcttaaaagggtttattaaaaagaatagtctggttccttataatattaataaaaag
aaaggtgaacttaagttcattattctgactgtgcatcaaacaaaaatcatgctacgtttt
gtgttgcgttctgaaaatatggtggaacagattcgggttgttttacctgaactacaacaa
ttaattccgaatctggtggtagtttctgccaatattcagcctaaacatgcagcaatttta
gagggtgaacaggaaattatcttgaccgagaatggtgtactacctgtgatgcttaatcag
attccactatttatccgtccacaaagttttttccaaaccaacaccaacgttgctgaaaaa
ctctatcaaaccgcaaatgagtggatcgatgagttaaattgttcctcacaacaagtgcaa
tctatttgggaccttttttgtggtgtaggtggttttggattgcattgcactaaacccaat
atgcgcctgaccgggattgaaattaatcaggaggcgatcgcctgtgccaaaaaatcggcg
gagcaattagggttgtctcacactgattttcgttctctggattccaccgcttttgctctg
gcacagcaagatattccggatttagttctggttaatccaccccgtcgggggattggcaag
gtactggctgaatatctgcaacaagtcgctccaaaatatattttatattcgagttgtaat
ccagatagcttagggcaggacctgcttagtttgactaattatcagctaaataaagtacaa
ctttttgatatgtttccccatacagaacatatggaagtcatggtactattaattaaaaaa
taa
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