Ornithinimicrobium avium: DV701_08045
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Entry
DV701_08045 CDS
T05559
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
orn
Ornithinimicrobium avium
Pathway
orn03030
DNA replication
orn03410
Base excision repair
orn03420
Nucleotide excision repair
orn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DV701_08045
03410 Base excision repair
DV701_08045
03420 Nucleotide excision repair
DV701_08045
03430 Mismatch repair
DV701_08045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
orn03032
]
DV701_08045
03400 DNA repair and recombination proteins [BR:
orn03400
]
DV701_08045
Enzymes [BR:
orn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DV701_08045
DNA replication proteins [BR:
orn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DV701_08045
DNA repair and recombination proteins [BR:
orn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DV701_08045
NER (nucleotide excision repair)
GGR (global genome repair) factors
DV701_08045
MMR (mismatch excision repair)
DNA ligase
DV701_08045
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DV701_08045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
HHH
PTCB-BRCT
Auto_anti-p27
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AXH96086
UniProt:
A0A345NM28
LinkDB
All DBs
Position
complement(1769456..1771639)
Genome browser
AA seq
727 aa
AA seq
DB search
MSQSTPQPPTDDVPDEARHAWTELAEEIREHQFAYYVKDAPLVSDGEFDALLRRLEAMED
EHPALRVPESPTQQVGGTFSTDFTAVDHLERMLSLDNAFSLEELDEWAARIEREAGGSQV
SYLCELKIDGLAVNLLYEEGRLVRALTRGDGRTGEDVTLNVRTIEGVPHQLRAPEHQEAS
GVVEEGAVVQDGADAEEPVPVPRLVEVRGEVFFPVEAFEELNAALVEAGKPPFANPRNTA
AGSLRQKDPRVTASRGLRMLVHGIGAREGFEVARQSGAYEALAAWGLPVSDRAKVVGTME
EVREFVAYYGEHRHDVEHELDGVVVKVDEVAVQRRLGTTSRAPRWAIAFKYPPEEVTTKL
LDIRVDVGRTGRVTPWGLMEPVQVAGSTVERATLHNQHEVERKGVLIGDTVVLRKAGDVI
PEILGPVVDKRDGSEVAFVMPTHCPSCGTPLRPEKEGDKDIRCPNSKECPAQLRERLYSL
AGRGAFDIEALGGEGVGALLDAGVLTNEATLFSLTAQDIATVPLYTRAARKNDPPESVVE
GRVLSANGVKLADNLQEARKQPLWRVLVALSIRHVGPTAARALATEFGSMDAIRAASLEE
LAATEGVGPVIAESVTAWFDVDWHREIVERWAADGVRMADERDATVERTLEGLTVVVTGS
LEGFSRDESKEAIVTRGGKAAGSVSRKTDYVVVGANAGSKAAKAEELGLTILDEAGFVRL
LETGPAD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgagccagagcaccccccagccacccaccgacgacgtccccgacgaggcccgccacgcg
tggaccgagctggccgaggagatccgcgagcaccagttcgcctactacgtcaaggacgcg
ccgctcgtcagcgacggggagttcgacgcgctgctgcgccggctggaggcgatggaggac
gagcaccccgcgctgcgcgtgcccgagagccccacgcagcaggtgggcgggaccttctcc
accgacttcaccgccgtggaccacctcgagcggatgctcagcctggacaacgccttctcc
ctcgaggagctcgacgagtgggccgcgcggatcgagcgcgaggcggggggctcgcaggtc
agctacctgtgcgagctcaagatcgacgggctcgccgtcaacctcctgtacgaggagggg
cgtctggtccgcgcgctcacccgcggcgacgggcgcaccggcgaggacgtgaccctcaac
gtgcgcacgatcgagggcgtcccgcaccagctccgcgcgcccgagcaccaggaggcgtcc
ggcgtcgtcgaggagggcgccgtggtgcaggacggtgcggacgccgaggagccggtcccg
gtgccgcggctggtcgaggtgcgcggagaggtgttcttccccgtggaggcgttcgaggag
ctcaacgccgcgctggtcgaggccggcaagccgccgttcgccaacccgcgcaacaccgcg
gccggctcgctgcggcagaaggacccgcgcgtcaccgcctcgcgtgggctgcggatgctc
gtgcacggcatcggggcccgcgagggcttcgaggtcgcccggcagtccggcgcctacgag
gcgctcgcggcctgggggctgccggtctcggaccgggccaaggtggtcgggacgatggag
gaggtgcgcgagttcgtcgcctactacggcgagcaccgccacgacgtggagcacgagctc
gacggggtcgtggtcaaggtcgacgaggtggcggtgcagcgccggctcgggacgacctcg
cgggcgccgcggtgggcgatcgccttcaagtacccgcccgaggaggtcaccaccaagctc
ctggacatccgggtggacgtcggccggaccgggcgggtgacgccgtggggcctgatggag
ccggtgcaggtggccgggtcgacggtcgagcgggccaccctgcacaaccagcacgaggtc
gagcgcaagggtgtgctcatcggcgacaccgtggtgctgcgcaaggcgggtgacgtcatc
cccgagatcctcgggccggtggtggacaagcgcgacggcagcgaggtcgcgttcgtcatg
cccacgcactgtccctcgtgcggcaccccgctgcgccccgagaaggagggcgacaaggac
atccgctgccccaacagcaaggagtgccccgcccagctgcgcgagcggctctactccctg
gccggccggggcgccttcgacatcgaggcgctcggcggcgagggggtgggtgcgttgctc
gacgccggcgtgctgaccaacgaggccacgctgttctcgctgaccgcgcaggacatcgcg
accgtgccgctctacacgcgcgcggcgaggaagaacgacccgccggagagcgtcgtcgag
ggccgcgtgctgtccgcgaacggcgtcaagctcgccgacaacctgcaggaggccaggaag
cagccgctgtggcgggtgctggtcgcgctgtcgatccggcacgtcggtccgacggccgcg
cgggcgctggccaccgagttcgggtcgatggacgcgatccgggcagcctcgttggaggag
ctggcggcgaccgagggggtggggccggtcatcgccgagtcggtgacggcgtggttcgac
gtcgactggcaccgtgagatcgtcgagcgctgggcggcggacggggtgcggatggccgac
gagcgcgacgcgacggtcgagcggacgctcgagggtctcaccgtggtcgtgaccggctcg
ctggagggcttcagccgggacgagtccaaggaggccatagtcacccgcggagggaaggcg
gccgggtcggtgagcaggaagaccgactacgtcgtcgtcggcgccaatgccgggtccaag
gccgccaaggccgaggagctggggctgacgatcctcgacgaggccggcttcgtgcggctg
ctggagaccgggcccgcagactga
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