KEGG   Ornithinimicrobium avium: DV701_08045
Entry
DV701_08045       CDS       T05559                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
orn  Ornithinimicrobium avium
Pathway
orn03030  DNA replication
orn03410  Base excision repair
orn03420  Nucleotide excision repair
orn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:orn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DV701_08045
   03410 Base excision repair
    DV701_08045
   03420 Nucleotide excision repair
    DV701_08045
   03430 Mismatch repair
    DV701_08045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:orn03032]
    DV701_08045
   03400 DNA repair and recombination proteins [BR:orn03400]
    DV701_08045
Enzymes [BR:orn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DV701_08045
DNA replication proteins [BR:orn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DV701_08045
DNA repair and recombination proteins [BR:orn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DV701_08045
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DV701_08045
   MMR (mismatch excision repair)
    DNA ligase
     DV701_08045
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DV701_08045
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia HHH PTCB-BRCT Auto_anti-p27 BRCT_2
Other DBs
NCBI-ProteinID: AXH96086
UniProt: A0A345NM28
LinkDB
Position
complement(1769456..1771639)
AA seq 727 aa
MSQSTPQPPTDDVPDEARHAWTELAEEIREHQFAYYVKDAPLVSDGEFDALLRRLEAMED
EHPALRVPESPTQQVGGTFSTDFTAVDHLERMLSLDNAFSLEELDEWAARIEREAGGSQV
SYLCELKIDGLAVNLLYEEGRLVRALTRGDGRTGEDVTLNVRTIEGVPHQLRAPEHQEAS
GVVEEGAVVQDGADAEEPVPVPRLVEVRGEVFFPVEAFEELNAALVEAGKPPFANPRNTA
AGSLRQKDPRVTASRGLRMLVHGIGAREGFEVARQSGAYEALAAWGLPVSDRAKVVGTME
EVREFVAYYGEHRHDVEHELDGVVVKVDEVAVQRRLGTTSRAPRWAIAFKYPPEEVTTKL
LDIRVDVGRTGRVTPWGLMEPVQVAGSTVERATLHNQHEVERKGVLIGDTVVLRKAGDVI
PEILGPVVDKRDGSEVAFVMPTHCPSCGTPLRPEKEGDKDIRCPNSKECPAQLRERLYSL
AGRGAFDIEALGGEGVGALLDAGVLTNEATLFSLTAQDIATVPLYTRAARKNDPPESVVE
GRVLSANGVKLADNLQEARKQPLWRVLVALSIRHVGPTAARALATEFGSMDAIRAASLEE
LAATEGVGPVIAESVTAWFDVDWHREIVERWAADGVRMADERDATVERTLEGLTVVVTGS
LEGFSRDESKEAIVTRGGKAAGSVSRKTDYVVVGANAGSKAAKAEELGLTILDEAGFVRL
LETGPAD
NT seq 2184 nt   +upstreamnt  +downstreamnt
gtgagccagagcaccccccagccacccaccgacgacgtccccgacgaggcccgccacgcg
tggaccgagctggccgaggagatccgcgagcaccagttcgcctactacgtcaaggacgcg
ccgctcgtcagcgacggggagttcgacgcgctgctgcgccggctggaggcgatggaggac
gagcaccccgcgctgcgcgtgcccgagagccccacgcagcaggtgggcgggaccttctcc
accgacttcaccgccgtggaccacctcgagcggatgctcagcctggacaacgccttctcc
ctcgaggagctcgacgagtgggccgcgcggatcgagcgcgaggcggggggctcgcaggtc
agctacctgtgcgagctcaagatcgacgggctcgccgtcaacctcctgtacgaggagggg
cgtctggtccgcgcgctcacccgcggcgacgggcgcaccggcgaggacgtgaccctcaac
gtgcgcacgatcgagggcgtcccgcaccagctccgcgcgcccgagcaccaggaggcgtcc
ggcgtcgtcgaggagggcgccgtggtgcaggacggtgcggacgccgaggagccggtcccg
gtgccgcggctggtcgaggtgcgcggagaggtgttcttccccgtggaggcgttcgaggag
ctcaacgccgcgctggtcgaggccggcaagccgccgttcgccaacccgcgcaacaccgcg
gccggctcgctgcggcagaaggacccgcgcgtcaccgcctcgcgtgggctgcggatgctc
gtgcacggcatcggggcccgcgagggcttcgaggtcgcccggcagtccggcgcctacgag
gcgctcgcggcctgggggctgccggtctcggaccgggccaaggtggtcgggacgatggag
gaggtgcgcgagttcgtcgcctactacggcgagcaccgccacgacgtggagcacgagctc
gacggggtcgtggtcaaggtcgacgaggtggcggtgcagcgccggctcgggacgacctcg
cgggcgccgcggtgggcgatcgccttcaagtacccgcccgaggaggtcaccaccaagctc
ctggacatccgggtggacgtcggccggaccgggcgggtgacgccgtggggcctgatggag
ccggtgcaggtggccgggtcgacggtcgagcgggccaccctgcacaaccagcacgaggtc
gagcgcaagggtgtgctcatcggcgacaccgtggtgctgcgcaaggcgggtgacgtcatc
cccgagatcctcgggccggtggtggacaagcgcgacggcagcgaggtcgcgttcgtcatg
cccacgcactgtccctcgtgcggcaccccgctgcgccccgagaaggagggcgacaaggac
atccgctgccccaacagcaaggagtgccccgcccagctgcgcgagcggctctactccctg
gccggccggggcgccttcgacatcgaggcgctcggcggcgagggggtgggtgcgttgctc
gacgccggcgtgctgaccaacgaggccacgctgttctcgctgaccgcgcaggacatcgcg
accgtgccgctctacacgcgcgcggcgaggaagaacgacccgccggagagcgtcgtcgag
ggccgcgtgctgtccgcgaacggcgtcaagctcgccgacaacctgcaggaggccaggaag
cagccgctgtggcgggtgctggtcgcgctgtcgatccggcacgtcggtccgacggccgcg
cgggcgctggccaccgagttcgggtcgatggacgcgatccgggcagcctcgttggaggag
ctggcggcgaccgagggggtggggccggtcatcgccgagtcggtgacggcgtggttcgac
gtcgactggcaccgtgagatcgtcgagcgctgggcggcggacggggtgcggatggccgac
gagcgcgacgcgacggtcgagcggacgctcgagggtctcaccgtggtcgtgaccggctcg
ctggagggcttcagccgggacgagtccaaggaggccatagtcacccgcggagggaaggcg
gccgggtcggtgagcaggaagaccgactacgtcgtcgtcggcgccaatgccgggtccaag
gccgccaaggccgaggagctggggctgacgatcctcgacgaggccggcttcgtgcggctg
ctggagaccgggcccgcagactga

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