Odobenus rosmarus divergens (Pacific walrus): 101366699
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Entry
101366699 CDS
T05148
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101366699 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oro03041
]
101366699 (EFTUD2)
Spliceosome [BR:
oro03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101366699 (EFTUD2)
Complex C
U5 SnRNP specific factors
101366699 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
101366699
NCBI-ProteinID:
XP_004407301
UniProt:
A0A2U3ZMP1
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggacgatgacgat
gatgacgacgatgtgggagaccatgatgaggaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccacagctgaggaggtgtacggccccgaggtggagaccatc
gttcaggaagaagacacccagcccctcaccgaacctattattaagccagtgaagaccaag
aaattcactctgatggagcagacattacctgtcacggtgtatgaaatggatttcttggca
gatctgatggataactcggaactcatcagaaatgtgaccctctgtggccatctccaccat
ggcaagacgtgttttgtagattgtttaatagagcagactcacccggaaatcaggaagcgc
tatgaccaagatctgtgctatactgacatcctcttcacagagcaagagagaggtgttggc
atcaaaagcactcctgtgacggtggtcttgccagataccaaaggaaaatcttaccttttc
aatatcatggacactccaggacatgtgaatttttctgatgaggtcacggctggcttgcgc
atctcagatggagttgtcctttttatcgatgctgctgaaggcgtgatgctgaacaccgag
cgactgatcaagcacgcagtgcaggagaggctggcggtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctcaagctgcctcccaccgatgcttattacaagctgcggcac
atcgtagatgaggtcaatgggctcataagcatgtattccacggatgagaacctgatcctt
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcactctg
ggctcctttgccaagatctatgctgacacctttggtgacattaactaccaggaatttgct
aaaagactctggggtgacatttatttcaaccccaaaacacgaaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagctttgtggagtttatcttggagcccctttataagatc
cttgctcaggttgtaggtgacgtggacaccagcctccccaggactctggacgagcttggc
attcacctgaccaaggaggagctgaagctgaacatccgccccctgctcaggctggtctgc
aaaaaattctttggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccctct
ccaaaggtgggcgccaagcccaagatagagcatacctacaccggtggtgtggattctgat
ctcggcgaggccatgagcgactgtgaccccgatggtcccctgatgtgccacactaccaag
atgtacagcacagatgatggagttcagtttcatgcctttggccgggtgctaagtggcacc
atccacgctgggcagcctgtgaaggtattgggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctctggatctctgtggccaggtaccacattgag
gtgaatcgtgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcgaccataactgaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaacaccacatctgttatcaagattgctgtggaaccggtcaacccctcagagctg
cccaagatgctggacggtctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggggagcacgtgattctaggtactggggagctctacttggactgtgtg
atgcacgacttgcggaagatgtactcagagatcgacatcaaggtggctgaccctgttgtc
acattttgtgagacagtggtggaaacatcttccctcaagtgctttgctgaaacgcccaat
aagaagaacaagatcaccatgattgccgagcctcttgagaagggcctcgccgaggacata
gagaacgaggtggtccagatcacctggaacaggaagaaactgggagagttcttccagacc
aagtatgattgggacctgctggctgcacgctccatctgggctttcggccctgatgccacc
ggccccaacatcctggtggatgataccctgccctctgaggtagacaaggctcttcttggt
tcagtgaaggacagcatcgttcaaggtttccagtggggaacccgggaggggcccctctgt
gatgagctgattcgaaatgtcaagtttaagatcctcgatgcagtggttgcccaagagccc
ctgcaccggggcgggggccagatcatccccacggcaaggagagtcgtctattctgccttc
ctcatggccactcctcgcctgatggagccttactactttgtggaggtccaggcccctgcg
gattgtgtctctgctgtgtacactgtcctggccaggcgcagggggcatgtgactcaggat
gcacctatcccaggctcccctctctacaccatcaaagctttcatccccgccattgattct
tttggctttgagactgatctgcgaactcacacccaggggcaggccttttccttgtctgtc
ttccaccattggcagattgtacccggcgatcctctggacaagagcattgtcatccgtccc
ctggagccacagcctgctcctcacctggcccgggaattcatgatcaaaacccgtcgcagg
aagggcctgagtgaggacgtaagcatcagcaagttcttcgatgatcccatgttgctggag
ctcgccaagcaggatgttgtgctcaattaccccatgtga
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