KEGG   Odobenus rosmarus divergens (Pacific walrus): 101376329
Entry
101376329         CDS       T05148                                 
Symbol
THBS1
Name
(RefSeq) thrombospondin-1 isoform X1
  KO
K16857  thrombospondin 1
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04015  Rap1 signaling pathway
oro04115  p53 signaling pathway
oro04145  Phagocytosis
oro04148  Efferocytosis
oro04151  PI3K-Akt signaling pathway
oro04350  TGF-beta signaling pathway
oro04510  Focal adhesion
oro04512  ECM-receptor interaction
oro04518  Integrin signaling
oro04820  Cytoskeleton in muscle cells
oro05144  Malaria
oro05165  Human papillomavirus infection
oro05205  Proteoglycans in cancer
oro05206  MicroRNAs in cancer
oro05219  Bladder cancer
Brite
KEGG Orthology (KO) [BR:oro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    101376329 (THBS1)
   04350 TGF-beta signaling pathway
    101376329 (THBS1)
   04151 PI3K-Akt signaling pathway
    101376329 (THBS1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101376329 (THBS1)
   04518 Integrin signaling
    101376329 (THBS1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    101376329 (THBS1)
   04148 Efferocytosis
    101376329 (THBS1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    101376329 (THBS1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101376329 (THBS1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101376329 (THBS1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    101376329 (THBS1)
   05205 Proteoglycans in cancer
    101376329 (THBS1)
  09162 Cancer: specific types
   05219 Bladder cancer
    101376329 (THBS1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    101376329 (THBS1)
  09174 Infectious disease: parasitic
   05144 Malaria
    101376329 (THBS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oro04131]
    101376329 (THBS1)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:oro00536]
    101376329 (THBS1)
Membrane trafficking [BR:oro04131]
 Endocytosis
  Phagocytosis
   Opsonins
    101376329 (THBS1)
Glycosaminoglycan binding proteins [BR:oro00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101376329 (THBS1)
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd cEGF EGF_3 EGF_CA TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2
Other DBs
NCBI-GeneID: 101376329
NCBI-ProteinID: XP_004400502
UniProt: A0A2U3VY93
LinkDB
Position
Unknown
AA seq 1170 aa
MGLAWGLSVLFLLHACGSSRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAIERKDHSGQVFSVV
SNGKAGTLDLSLTVQGMQHVVSVEEALLATGQWKSITLFVQEDRAQLYIGCEKMENAELD
VPVQSIFTRDLATTARLRVAKGGVNDNFQGVLQNVRFVFGTTPEAILRNKGCSSATSVLL
TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK
VTEENKELAIELRRPPLCYHNGVQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCSN
ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQT
RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE
TKACQKDACPINGGWGPWSLWDLCSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDATENQI
CNKQDCPIDGCLSNPCFAGVKCTSYPDGSWKCGACPPGYSGNGVQCQDVDECREVPDACF
HHSGEHRCENTDPGYNCLPCPPRFTGTQPFGQGVDYATAHKQVCKPRNPCTDGTHDCNKN
AKCSYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN
LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN
HNPDQADTDSNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGIGDQCDNCPLEH
NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN
DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENIDISETDFRRF
QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD
DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL
WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD
KTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq 3513 nt   +upstreamnt  +downstreamnt
atggggctggcctggggactcagtgtcctattcctgttgcacgcatgtggctccagccgc
attcctgagtctgggggagacaacagcgtgttcgacatctttgaactcaccggggctgcc
cgtaagggctccgggcgccgcctggtgaagggtcctgacccttccagcccagctttccgc
attgaggatgccaacctaatcccccccgtgcctgatgacaagttccaagacctggtggat
gctgtgcgggcagagaaaggcttccttctcttggcctccctgaggcaaatgaagaagacc
cgaggcacgctgctggccatagaacggaaagaccactcgggccaggtcttcagtgtggtc
tccaatggcaaagcgggcaccttggacctgagcctgaccgtgcaggggatgcaacacgtg
gtgtcggtggaagaagcgctgctggcgaccggccagtggaagagcatcaccctgtttgtg
caggaggaccgggcccagctgtacattggctgtgagaaaatggagaacgcagagctggac
gtccccgtccagagcatcttcaccagggacctggccaccacggccaggctccgcgtcgca
aaaggaggagtcaatgacaatttccagggggtgctgcagaacgtgaggtttgtctttgga
accacaccagaagccatcctcaggaataaaggctgttcgagcgccaccagtgtccttctc
accctcgacaacaatgtggtaaacggctccagccctgccatccgcactaactacattggc
cacaagacgaaggatctgcaggccatctgcggcatctcctgtgatgagctgtccagcatg
gtcctggagttgaggggcctgcgcaccatcgtgaccacgctccaggacagcatccgcaaa
gtgactgaagagaacaaagagttggccattgagctgaggaggcctcccctctgctaccac
aatggagttcagtacaggaataatgaggagtggaccgttgatagctgcacggagtgccac
tgtcagaactccgttaccatctgcaagaaagtgtcctgccctatcatgccctgctccaat
gccactgtccctgacggagaatgctgtccacggtgttggcccagcgactctgcggatgac
ggctggtccccatggtccgagtggacctcctgctctgcgacctgtggcaatggaatccaa
cagcgcggtcgctcctgtgacagcctcaacaaccgatgcgagggctcctctgtccagacg
cggacctgccatattcaggagtgcgataagagatttaaacaggatggcggctggagccac
tggtccccatggtcgtcttgttccgtgacctgtggcgatggtgtgatcacaagaattcga
ctctgcaattctccgagcccccagatgaacgggaagccatgtgaaggcgaagcccgggag
accaaagcctgccagaaagacgcctgccccatcaatggaggctggggtccctggtcgctg
tgggacctctgttctgtcacctgtggaggaggggtgcagaaacgtagccggctctgtaac
aaccccacaccccagtttggaggcaaggactgtgtcggcgacgcgacagaaaaccagatc
tgcaacaagcaggactgcccaattgacggatgcctgtccaatccctgctttgctggggtc
aagtgcacgagttacccggacggcagctggaagtgcggtgcctgtcccccgggctacagc
ggaaatggcgtccagtgccaagacgtggatgagtgcagagaagtacctgacgcctgcttc
caccacagcggcgagcaccggtgtgagaacacggaccccggctacaactgcctgccctgc
ccgccgcgcttcacgggcacacagcccttcggccagggtgtggactacgccaccgcccac
aaacaggtgtgcaagccgcgcaacccctgcacggacgggacgcacgactgcaacaagaac
gccaagtgcagctacctgggccactacagcgaccccatgtaccgctgcgagtgcaagccc
ggctacgcgggcaatggcatcatctgcggggaggacacagacctggacggatggcccaac
gaggacctggtgtgcgtggccaatgccacctaccactgcaaaaaggataactgccccaac
ctgcccaactccgggcaggaggactacgacaaggacgggatcggcgacgcctgtgatgac
gatgatgacaatgataaaatcccagacgacagggacaactgccccttccattacaaccca
gcccagtatgactatgaccgagatgatgtgggagaccgctgtgacaactgcccctacaac
cacaacccagatcaggctgacacggacagcaacggggaaggagatgcctgtgccgcggac
atcgatggggacggtatcctcaatgaacgagacaactgccagtatgtctacaacgtggac
cagagggacacagatatggatgggattggagatcagtgtgacaactgccccctggaacac
aatccagatcagctcgactctgactcagaccgcattggagatacctgtgacaacaatcag
gatattgatgaagatggccaccagaacaacctggacaactgtccctatgtgcccaatgcc
aaccaggctgaccatgacaaagatggcaagggagatgcctgtgaccatgatgatgacaat
gatggcattcctgatgatagggacaactgcagactcgtgcccaatcctgaccagaaggat
tctgatggtgatggtcgaggtgatgcttgcaaagatgactttgaccatgacaatgtgcca
gacatcgatgacatctgtcctgaaaacattgatatcagtgagactgacttccgccgattc
cagatgattcctctagatcccaaagggacatcccagaatgaccctaactgggttgtacgc
catcagggtaaagaacttgtccagaccgtcaactgtgatcctggacttgctgtaggttat
gatgagtttaatgccgtggacttcagtggcaccttcttcatcaacactgaaagggatgac
gactatgctggatttgtgtttggctaccagtctagcagccgcttttatgtcgtaatgtgg
aagcaagtcacccagtcctactgggacaccaaccccactagggctcagggatactcaggc
ctttctgtgaaagtcgtgaactctaccaccgggccaggagagcatctgcggaatgccctg
tggcacacgggaaacaccccaggccaggttcgcactctgtggcatgaccctcgtcacata
ggctggaaagatttcactgcctacagatggcgtcttagccaccggcccaagaccggcttc
attagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctatgac
aaaacctatgctggtggtaggctagggttgtttgtcttctctcaagaaatggtgttcttc
tccgacctgaaatacgaatgcagagattcctaa

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