KEGG   Odobenus rosmarus divergens (Pacific walrus): 101378047
Entry
101378047         CDS       T05148                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04060  Cytokine-cytokine receptor interaction
oro04061  Viral protein interaction with cytokine and cytokine receptor
oro04062  Chemokine signaling pathway
oro04064  NF-kappa B signaling pathway
oro04360  Axon guidance
oro04670  Leukocyte transendothelial migration
oro04672  Intestinal immune network for IgA production
oro04810  Regulation of actin cytoskeleton
oro05163  Human cytomegalovirus infection
oro05200  Pathways in cancer
oro05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:oro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    101378047 (CXCL12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    101378047 (CXCL12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    101378047 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101378047 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    101378047 (CXCL12)
   04672 Intestinal immune network for IgA production
    101378047 (CXCL12)
   04062 Chemokine signaling pathway
    101378047 (CXCL12)
  09158 Development and regeneration
   04360 Axon guidance
    101378047 (CXCL12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101378047 (CXCL12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    101378047 (CXCL12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    101378047 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:oro04052]
    101378047 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:oro00536]
    101378047 (CXCL12)
Cytokines and neuropeptides [BR:oro04052]
 Cytokines
  Chemokines
   101378047 (CXCL12)
Glycosaminoglycan binding proteins [BR:oro00536]
 Heparan sulfate / Heparin
  Chemokines
   101378047 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 101378047
NCBI-ProteinID: XP_004417417
UniProt: A0A2U3X501
LinkDB
Position
Unknown
AA seq 184 aa
MNAKVVVVLAIVLVALCLSDGKPVSLSYRCPCRFFESHIARANVKHLKILNTPNCALQIV
ARLKNNNRQVCIDPKLKWIQEYLEKALNNLASASHFCTCSMGRRVIAGALPCSPLLPLPS
PPAQALCENLLWPSPEWGWPSPGVGGGGWKVMSPPFLERLVFAESNAIFNLRTCFEEFGF
CGCL
NT seq 555 nt   +upstreamnt  +downstreamnt
atgaatgccaaggtcgtcgtcgtgctggccatcgtgctggttgcgctgtgcctcagcgac
gggaaaccggtcagcctgagctaccgatgtccttgccgattcttcgagagccacattgcc
agagccaacgtcaagcatctcaaaatcctcaacactcccaactgcgcccttcagatcgtg
gcaaggctgaagaacaacaatagacaagtgtgcattgacccgaaattgaagtggattcag
gaatacctggagaaagctttaaacaatcttgcttctgcttctcatttctgtacatgctcc
atggggaggagggtgattgccggagcgctgccctgcagccccctcctccctttgccctcc
cctcctgctcaggccctctgtgagaatcttctctggccttctccagaatggggctggccc
tctcctggggtggggggagggggttggaaggtcatgtctccgcctttcctcgaaaggctg
gtctttgcagaatcaaatgcaattttcaatctgagaacttgttttgaggaattcggtttc
tgtggttgcctctga

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