Odobenus rosmarus divergens (Pacific walrus): 101380364
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Entry
101380364 CDS
T05148
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03018
RNA degradation
oro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101380364 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
101380364 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101380364 (LSM3)
03041 Spliceosome [BR:
oro03041
]
101380364 (LSM3)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101380364 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
101380364 (LSM3)
Spliceosome [BR:
oro03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101380364 (LSM3)
Complex C
U2 snRNP components
101380364 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
101380364
NCBI-ProteinID:
XP_004395729
UniProt:
A0A2U3VL80
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaactaccaacactgtagaagagcccctggatctc
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaatgacagagagcttcga
ggcagattacatgcttatgatcagcatttaaatatgatattgggagatgtggaagaaact
gtgactactatagaaattgatgaggaaacatacgaagagatatataaatcaacaaaacgg
aatattccaatgctttttgtccggggagatggtgttgtactagttgcccctcctttaaga
gttggctga
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