KEGG T01015: 107275269

Oryza sativa japonica (Japanese rice): 107275269

Entry

107275269         CDS       T01015

Name

(RefSeq) protein argonaute 12

K11593

eukaryotic translation initiation factor 2C

Organism

osa Oryza sativa japonica (Japanese rice)

Brite

KEGG Orthology (KO) [BR:osa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    107275269
   03036 Chromosome and associated proteins [BR:osa03036]
    107275269
Messenger RNA biogenesis [BR:osa03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107275269
Chromosome and associated proteins [BR:osa03036]
Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    107275269
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     107275269
   microRNA pathway
    RISC loading complex
     107275269

SSDB

Motif

Pfam:

Piwi ArgoN PAZ ArgoL1 ArgoL2 ArgoMid

Other DBs

NCBI-GeneID:

107275269

NCBI-ProteinID:

XP_066164335

LinkDB

Position

3:complement(join(28026381..28026550,28026677..28026708,28026822..28026916,28027014..28027087,28027190..28027319,28027429..28027492,28027567..28027629,28027702..28027844,28028293..28028430,28028517..28028638,28028712..28028883,28028982..28029104,28029466..28029537,28029660..28029767,28029894..28030010,28030091..28030223,28030362..28030468,28030570..28030679,28030851..28030988,28031144..28031286,28031379..28031578,28033651..28034328))

AA seq 1043 aa
MSSRGGGGGGRRGGRGGGGGREGGGGGGGGGGRGGQGRGDLGVVGERQGGGRGAGERGGR
HDAPRGRGGVAVGAGAGRQQQQPFHAPAPPSGGGGRGGVQVQPNAAARRPVGGGRGGVGV
PAPAPAVAVGALCGEMKGKMVVSGGAPPAGQGSSLAAAQGTDNVKREPSQVAAPAPAPPP
ATLPPSSSKAVTFPARPDVGTIGRRCRVRANHFLVQVADKDIYHYDVVITPESTYRERNR
SIINKLVALHKQFLDGRLPVYDGRKSIYTAGPLPFKTKDFVVKHINPLRGNQREEEYKVT
IKQASKTDLYSLKQFLVGRQRELPQDTIQALDIALRECPTYRYVSISRSFFSQSFGHGGE
IGSGTECWRGYYQSLRPTQMGLSLNIDISATAFYKAQPVMDFAVQYLNIRDVSRRLSDQD
RIKLKKALKGVQIVATHWKEKSIRYKITGIPSAPMNELMFDLDGNRISVVQYFKKQYNYS
LKHVNWPCLQAGSDSRPKYLPMEVCSILEGQRYSKKLNEHQVTNILRMTCERPAQRESSI
IEIVNTNSYGNDDCAKEFGIKVANQLAVVDARVLPTPRLKYHDSGREKVCNPSVGQWNMI
NKRMVNGGCINHWTCLSFASRMHVNDIRMFCEDLVGMCNNIGMQMNTRPCVDIIQGQQRN
IEGAIRNIHRQSSEKLDQQDLTGQQLQLLIVILTEISGSYGRIKRICETEVGVITQCCAP
KSLQKGGKQYLENLALKMNVKVGGRNTVLEDALHKKIPILTDRPTIVFGADVTHPSPGED
ASPSIAAVVASMDWPEVTKYKCLVSTQSHREEIISNLYTEVKDPLKGIIRGGMIRELLRS
FYQETGQKPSRIIFYRDGISEGQFSQVLLYEMDAIRKACASLQEGYLPPVTFVVVQKRHH
TRLFPENRRDMMDRSGNILPGTVVDTMICHPSEFDFYLCSHSGIKGTSRPTHYHVLLDEN
GFKADTLQTLTYNLSYTYARCTRAVSIVPPAYYAHLGAFRARYYMEDEHSDQGSSSSVTT
RTDRSTKPLPEIKENVKRFMFYC

NT seq 3132 nt +upstreamnt +downstreamnt
atgtcttcgcgcggcggcggcggcggaggccgccgcggtgggcgaggcggcggtggtggg
cgggaaggaggcggaggtggaggtggaggtggcgggaggggtggccagggtaggggcgat
ctcggcgtcgtcggcgagcggcaaggcggtggtcgaggggcgggtgagcgcggaggccgt
cacgacgcgccgcgcggccgtggcggcgtcgctgtgggcgccggggctgggcggcagcag
cagcagccattccacgccccggccccgccatctggcggcggcggacgaggcggcgtgcag
gtgcagcccaatgcggcggcgcgtcgacccgtaggcggcgggcgcggcggcgtcggagtg
ccggcgcctgcgccggcggttgcggtgggggctctgtgcggcgagatgaaggggaagatg
gttgtgtcgggtggagcgccgccagcaggccagggttcgtcgttggcggcggcgcagggc
acggacaatgtcaagagagagccatctcaggtcgccgcaccggcgcccgcgcccccgccc
gcgacgctgccgccgtcgtcgagcaaggcggtgaccttcccggcgcgtccggacgtcggc
acgatcgggaggcggtgccgcgtccgcgccaaccatttcctggtgcaagtcgcggacaag
gacatctaccactacgacgtggtgatcactccagaatcaacttatcgtgagagaaataga
tcaataatcaacaaacttgttgcgttgcacaaacaattcttggatggtaggttacctgtc
tatgatggaagaaagagcatatatactgcaggtccactacctttcaaaaccaaagacttt
gttgtcaagcacattaatcctttgaggggtaaccaacgggaggaggaatacaaggtgacc
ataaagcaagcctccaaaacagatctgtacagccttaagcagtttttggttggaaggcag
agggagttgccacaggacactattcaagctcttgacattgctcttagggaatgccctacc
tacaggtatgtatctatctcaaggtcatttttctcccaatcatttgggcatggtggcgag
attggtagtggtacagagtgttggagggggtattaccaaagtctgcgccccacgcagatg
ggactgtcgctaaatatcgatatttctgcaacagcattttacaaggcccagccagtgatg
gactttgcagttcagtatttgaacatccgagatgtttcaaggcgcttgtctgatcaagat
cgtattaaactgaaaaaggccctaaaaggagtccaaattgtggcaactcactggaaagag
aaatccatacgttacaagatcactggaataccctcagctccaatgaatgaattgatgttt
gatctagatggaaacaggatatcagtcgtccaatactttaagaaacagtacaattactcc
ttaaaacatgttaattggccatgccttcaagctggcagtgatagcagaccaaaatatttg
cctatggaggtctgcagtatacttgaaggacaacggtattcgaagaagctaaatgagcat
caagttacaaacattctaaggatgacatgtgaacgacccgcacaaagggagagcagtatc
atagagattgttaatacgaactcttatggcaatgatgattgtgcaaaagaatttggcatc
aaagtcgctaaccaacttgccgtggttgatgcccgtgtactgcctacccctaggcttaaa
tatcatgactctggaagagaaaaagtatgtaatccttccgttggacaatggaacatgatt
aacaagaggatggtaaatggaggatgtatcaaccattggacctgcctatcttttgcttct
cggatgcatgtaaatgacattaggatgttttgtgaagacctggttggcatgtgcaataat
attggcatgcaaatgaatacgagaccatgtgtggatatcatacaaggacagcaacgcaac
atcgagggtgcaatcagaaatatccataggcaatcttcagaaaagcttgaccagcaagac
ctgacagggcagcaacttcagttattaattgtaatattgactgaaattagtggttcttat
ggaaggataaaacgaatttgtgaaacagaggttggtgtgataactcaatgctgtgcaccc
aagagtcttcagaaaggtgggaaacagtatcttgaaaatctggccctaaaaatgaatgtt
aaggtcggggggcgaaatacagtacttgaagatgcgttgcacaagaaaataccaattctg
acagatcgtcctacgatagtgtttggagcggatgttacacatccatctcctggggaggat
gcttctccatccattgcagcggttgttgcatccatggattggccagaagttacaaagtac
aaatgcttggtatctacacaaagtcatagggaagaaatcatatctaatctttacacagaa
gtgaaagatccattgaagggaattattagaggtggaatgattagggagttgctcaggtct
ttctaccaagaaactggacagaaacctagccggattatattttatcgagatggtatcagc
gagggacagtttagccaagtgttgctttatgaaatggatgcaattcgcaaggcatgtgct
agtttgcaggagggctaccttcctccagttacatttgttgttgtccagaaaaggcatcac
acccgcctatttccagaaaatcgtcgagatatgatggatagaagcggaaatatccttcct
ggaactgttgttgacacaatgatctgccatccgagtgagtttgacttttacctctgtagc
cattctggtatcaaggggacgagccgtccaacacattatcatgttcttttagatgaaaat
gggttcaaggctgatacgctgcaaaccctaacctacaatcttagctacacctatgcccga
tgcacccgagcagtctccatagttcctccagcatactatgcgcatctgggagccttccga
gcacgctactacatggaggacgagcattctgatcagggctcttcttcctccgtaacgacg
cgaacggatcgatcgacgaagccgcttcctgaaatcaaggagaatgttaagcggttcatg
ttctactgctga

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