KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 107275506
Entry
107275506         CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107275506
   04120 Ubiquitin mediated proteolysis
    107275506
  09126 Chromosome
   03083 Polycomb repressive complex
    107275506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    107275506
   04121 Ubiquitin system [BR:osa04121]
    107275506
   03036 Chromosome and associated proteins [BR:osa03036]
    107275506
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107275506
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     107275506
   Cul7 complex
     107275506
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107275506
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107275506
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 107275506
NCBI-ProteinID: XP_015611431
UniProt: Q6H4D6
LinkDB
Position
9:complement(5587864..5588526)
AA seq 165 aa
MAAVKEGADAGDSKILLISSDGQHFQVTEAEASMSKLVSNMIEDGCTENGVPLPNVASNV
LAKVLEYCKKHAAAAAAEDVAVKDQELKSFDASFIDVDNTMLFNLILAANYLNVPSLLDL
ACQHTADLIKGKTVQEIRDMFGIVNDFTPEEEEEIRKENEWAFEN
NT seq 498 nt   +upstreamnt  +downstreamnt
atggcggcagtaaaggagggagccgacgccggcgacagcaagatccttctgatcagctcg
gacgggcagcacttccaggtgacggaggcggaggcgagcatgtcgaagctagtgagcaac
atgatcgaggacggctgcacggagaacggcgtccctctccccaacgtcgcctccaacgtc
ctcgccaaggtgctcgagtactgcaagaaacacgccgccgccgccgctgccgaggacgtc
gccgtgaaggatcaggagctgaagagcttcgatgccagcttcatcgatgtcgacaacacg
atgctgttcaacttgatcttggccgccaactacttgaacgtgccgtctctacttgatctt
gcgtgccaacacacggctgacttgatcaagggcaagacggtacaggagatcagggacatg
ttcgggatcgtcaacgacttcacaccagaggaggaggaggagatccgcaaggagaacgaa
tgggccttcgagaactag

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