KEGG   Oryza sativa japonica (Japanese rice): 107275529
Entry
107275529         CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107275529
   04120 Ubiquitin mediated proteolysis
    107275529
  09126 Chromosome
   03083 Polycomb repressive complex
    107275529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    107275529
   04121 Ubiquitin system [BR:osa04121]
    107275529
   03036 Chromosome and associated proteins [BR:osa03036]
    107275529
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107275529
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107275529
   Cul7 complex
     107275529
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107275529
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107275529
SSDB
Motif
Pfam: Skp1 Skp1_POZ CobS_N Flu_PB2_4th
Other DBs
NCBI-GeneID: 107275529
NCBI-ProteinID: XP_015611090
UniProt: Q6H4D4
LinkDB
Position
9:complement(9923181..9923699)
AA seq 172 aa
MAASAAAADGAADGEKMILLISSDGAKFELSEAAASLSKTLGNMIEDDCATNGAIPLANV
ASDILAKVVEYCNKHAAATATATAAAKASGEEELSKFDAEFVSVDRKKLFGLINAANFLN
MPCLLELTCQRAADLIKDMMPEQVREVFGIENDFTPEEEAEVRNENAWAYEM
NT seq 519 nt   +upstreamnt  +downstreamnt
atggcagcatcggcagcagcagcagacggcgccgccgatggcgagaagatgatcctgctg
atcagctcggacggcgcgaaattcgagctgtcggaggcggcggcgagcctgtccaagacg
ttgggtaacatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtc
gcctccgatatcctcgccaaggtggtcgagtactgcaacaagcacgccgccgccaccgcc
acagccaccgccgccgcgaaagctagcggagaggaggagctcagtaagttcgacgccgag
ttcgtcagcgtcgacaggaagaagttgttcggcctgatcaatgccgccaacttcctgaac
atgccgtgcctgctggagctgacatgccagcgcgcggcggacttgatcaaagacatgatg
ccggagcaggtcagggaggtatttgggatcgagaacgacttcacgccggaggaggaggcc
gaggtccgtaacgagaacgcctgggcctatgagatgtag

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