Oryza sativa japonica (Japanese rice): 107275597
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Entry
107275597 CDS
T01015
Name
(RefSeq) amino acid transporter AVT1I
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107275597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osa02000
]
107275597
Transporters [BR:
osa02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
107275597
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
107275597
NCBI-ProteinID:
XP_015638450
UniProt:
Q7F4G2
A2ZUU6
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Position
1:join(23389008..23389862,23391317..23391844)
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AA seq
460 aa
AA seq
DB search
MAADKSPIDEALLHRQEDLRDEVDYDMEHLLLPTGSNMEQHLLLPTGSNMEQHLLLPTGG
GSFCMTGASFGRSCLNLSNIISGIGMLSVPYALSQGGWLSLTLFTMVGAICFYTGNLIDR
CMRVDRCVRSYPDIGYLAFGSYGRMAIGLVIYVELYLVAISFLILEGDNLDKLLPGIVVE
ILGYQVHGKQLFVLAAAAVILPTTWLKNLSMLAYVSAVGLVSSVALTASLVWAGVAGKGF
HMEGSSLLNLSELPTALSLYFVCFAGHGVFPTVYSSMNSKKDFPKVLLISLVLCSLNYAV
TAVLGYLIYGEDVQAQVTLSLPTGKLYTRIAILTTLITPLAKYALVIQPVTIAIEEKLSA
TTDAEINRLTRVLTSTAVVISTVVLACTVPFFGYLISFIGSSLNVTVAVLFPCLSYLKIY
MSRGGVGCFEMAAIIGILVIGVCVAIVGTYTSLQQIIGTF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggataagagtcctatcgatgaggctcttctccataggcaagaagatctacga
gatgaggtggattacgacatggagcatctcctcctccctaccggcagcaacatggagcag
catctcctcctccctaccggcagcaacatggagcagcatctcctcctccctaccggcggc
ggctcattttgtatgaccggcgcttcctttgggaggagctgcctaaaccttagcaacatc
atatccggcatcgggatgctctctgtgccgtacgcgctatcccagggcgggtggctcagc
ttgacactcttcaccatggtcggcgccatctgcttctacactggcaacctaattgaccgg
tgcatgcgcgtcgaccgctgtgtacggagctacccagacatcggctacctcgccttcggc
agctacggccggatggccatcggcctcgtcatatacgtcgagctctacctcgtcgccatc
agcttcctcatcctcgagggcgacaacctcgacaagctcctccctggcatagtggtggag
atcctagggtaccaggttcacgggaagcaactgttcgtgctcgcggcggccgccgtcatc
cttccgacaacgtggctcaagaacctcagcatgcttgcgtacgtctcggcggttgggctc
gtctcgtcggtggcgctgacggcatcgctggtctgggccggcgtggccggcaagggcttc
cacatggagggcagcagcctcttgaatctgagcgagctgcccaccgcccttagcctctat
ttcgtctgcttcgctggacatggcgttttcccgactgtgtactcctcaatgaactctaag
aaggattttcctaaggttttgctgatctctttggtgctgtgcagtctcaactacgcagtg
acagcggtgttgggatatctgatctatggtgaggatgtgcaggcgcaagtgacactgagc
ttacccacggggaagctgtacactaggatcgccatcctgacgacactaatcaccccgcta
gcgaagtacgcgctcgtgatccagccagtcacaatagcgatagaggagaagctgtcagcg
acgacggacgccgagatcaacaggctgactagggtgctcaccagcacagccgtcgttatc
agcacggtggtgctggcatgcacggtgcccttcttcggctacctcatatcattcatcggg
tcctcgctgaacgtcaccgttgctgtgttgttcccgtgcttgagctacctcaagatctac
atgtcccgaggaggagttggctgcttcgagatggcggcgatcatcgggatactggtcatc
ggagtgtgtgtcgccattgttggcacctacacctcccttcagcagattataggcacattt
tga
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