Oryza sativa japonica (Japanese rice): 107275815
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Entry
107275815 CDS
T01015
Name
(RefSeq) nuclear poly(A) polymerase 4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107275815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
107275815
Enzymes [BR:
osa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
107275815
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
107275815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
107275815
NCBI-ProteinID:
XP_015635369
UniProt:
A0A0P0WEF8
Q7XN15
LinkDB
All DBs
Position
4:30236881..30238551
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AA seq
556 aa
AA seq
DB search
MASQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGV
VDRWVKRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFF
GALAAALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVL
RGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWA
ILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNP
RDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQ
PFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQP
YAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGM
EVAVAHVRRKDLPSYVLRQLLRSPGRHDQLKRKRADDDPSSSPAASDHSASSSSSRDAKR
PAAAPGRIGSSFEKKT
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagtcgccacagtcgcggggcgtcgcggagcccatctcgctcgtcggcccg
acgccggccgacctggagagcacggcgcggctggagaggctcctccgcgaggagggcctg
tacgagagcgccgaggagacggcggcccgggaggaggtgctccgcggcctccgcggcgtc
gtcgaccgctgggtgaagcgcctcacgcggcagcgcgggtaccccgacggcatggccgac
cgggccaccgccctggtgctccccttcggctcctaccgcctcggcgtccacggccgcggc
tccgacatcgacgcgctcgtcgtcggcccgtcctacgtcgactgcgaccgcgacttcttc
ggcgcgctcgccgccgcgctggcggagacggcggccgtcgccgagctccagcccgtgccc
ggcgcgcacgttcccgtgatcaagatgaggttccacggcgtgcaggtggacctcgtgtac
gccggcgtgtgcctccccgtggtgcccggcgacctggacctcagcggccggtcggtgctc
cgcggcctcgacctcgccaccgcgcgcagcctcaacggcgtccgcgtggccgacgagatc
ctgcggctggtcccggacgccgccgcgttccgcaccacgctgcggtgcgtgaagcactgg
gccaaggcgcggggcgtctactccaacgtcgcgggcttcctcggcggcgtcggctgggcc
atcctcgtggcgtgcgtgtgcttgctctaccccaacgcctcccccagcatgctgctcccg
cgcttcttccgcgtcttcgcgcggtggaagtggcccagcccggtgatgctgcgcgccatc
gagcacgacgacggcgagctcggcctcagcctcccggtctgggacccccgccggaatccg
cgggacaagatacacctcatgcccatcgtgacgccggcgtacccgtgcatgaactccggc
tacaacgtctcgcacgccaccctgcgcgtcatcaccgagcagctcgccgtcggcgacgcc
gtctgccaggagatcgtcaaggccggcagcggcggcggcgggtgggacaagctgttccag
ccgttcaacttcttcggcgcgtacaagagctacctccaggtggacgtgacggtgaccggc
ggggaggaggacgacctccgcgagtggaagggctgggtggagtcgcggctgaggctgctg
tcggccagggtggaggcggacacgtccgggatgctgctctgccacctgcacccgcagccg
tacgccgccgagccccacaacgagccgcggcggcggcggcgcacgtcgtccttcttcgtg
ggcttgtccaagccaccggcgcagccgcagcagcagcagcatcagctgttcgacctccgc
gcgacgacagaggggttcaaggaggaggtgtacatgtacgactactggaggcccggcatg
gaggtcgcggtggcgcacgtccgccggaaggacctgccgtcctacgtgctgcggcagctg
cttcgctcgcctggccgccatgatcagctcaagaggaagcgcgccgacgatgatccgtct
tcttcccctgctgcttccgatcactccgcttcgagctcgagcagcagggacgccaagagg
ccggcggctgcgccgggcaggatcggatcgtcgtttgagaagaagacgtag
DBGET
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