KEGG   Oryza sativa japonica (Japanese rice): 107275815
Entry
107275815         CDS       T01015                                 
Name
(RefSeq) nuclear poly(A) polymerase 4
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107275815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    107275815
Enzymes [BR:osa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     107275815
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     107275815
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 107275815
NCBI-ProteinID: XP_015635369
UniProt: A0A0P0WEF8 Q7XN15
LinkDB
Position
4:30236881..30238551
AA seq 556 aa
MASQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGV
VDRWVKRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFF
GALAAALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVL
RGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWA
ILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNP
RDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQ
PFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQP
YAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGM
EVAVAHVRRKDLPSYVLRQLLRSPGRHDQLKRKRADDDPSSSPAASDHSASSSSSRDAKR
PAAAPGRIGSSFEKKT
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcttcccagtcgccacagtcgcggggcgtcgcggagcccatctcgctcgtcggcccg
acgccggccgacctggagagcacggcgcggctggagaggctcctccgcgaggagggcctg
tacgagagcgccgaggagacggcggcccgggaggaggtgctccgcggcctccgcggcgtc
gtcgaccgctgggtgaagcgcctcacgcggcagcgcgggtaccccgacggcatggccgac
cgggccaccgccctggtgctccccttcggctcctaccgcctcggcgtccacggccgcggc
tccgacatcgacgcgctcgtcgtcggcccgtcctacgtcgactgcgaccgcgacttcttc
ggcgcgctcgccgccgcgctggcggagacggcggccgtcgccgagctccagcccgtgccc
ggcgcgcacgttcccgtgatcaagatgaggttccacggcgtgcaggtggacctcgtgtac
gccggcgtgtgcctccccgtggtgcccggcgacctggacctcagcggccggtcggtgctc
cgcggcctcgacctcgccaccgcgcgcagcctcaacggcgtccgcgtggccgacgagatc
ctgcggctggtcccggacgccgccgcgttccgcaccacgctgcggtgcgtgaagcactgg
gccaaggcgcggggcgtctactccaacgtcgcgggcttcctcggcggcgtcggctgggcc
atcctcgtggcgtgcgtgtgcttgctctaccccaacgcctcccccagcatgctgctcccg
cgcttcttccgcgtcttcgcgcggtggaagtggcccagcccggtgatgctgcgcgccatc
gagcacgacgacggcgagctcggcctcagcctcccggtctgggacccccgccggaatccg
cgggacaagatacacctcatgcccatcgtgacgccggcgtacccgtgcatgaactccggc
tacaacgtctcgcacgccaccctgcgcgtcatcaccgagcagctcgccgtcggcgacgcc
gtctgccaggagatcgtcaaggccggcagcggcggcggcgggtgggacaagctgttccag
ccgttcaacttcttcggcgcgtacaagagctacctccaggtggacgtgacggtgaccggc
ggggaggaggacgacctccgcgagtggaagggctgggtggagtcgcggctgaggctgctg
tcggccagggtggaggcggacacgtccgggatgctgctctgccacctgcacccgcagccg
tacgccgccgagccccacaacgagccgcggcggcggcggcgcacgtcgtccttcttcgtg
ggcttgtccaagccaccggcgcagccgcagcagcagcagcatcagctgttcgacctccgc
gcgacgacagaggggttcaaggaggaggtgtacatgtacgactactggaggcccggcatg
gaggtcgcggtggcgcacgtccgccggaaggacctgccgtcctacgtgctgcggcagctg
cttcgctcgcctggccgccatgatcagctcaagaggaagcgcgccgacgatgatccgtct
tcttcccctgctgcttccgatcactccgcttcgagctcgagcagcagggacgccaagagg
ccggcggctgcgccgggcaggatcggatcgtcgtttgagaagaagacgtag

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