KEGG   Oryza sativa japonica (Japanese rice): 107275970
Entry
107275970         CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107275970
   04120 Ubiquitin mediated proteolysis
    107275970
  09126 Chromosome
   03083 Polycomb repressive complex
    107275970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    107275970
   04121 Ubiquitin system [BR:osa04121]
    107275970
   03036 Chromosome and associated proteins [BR:osa03036]
    107275970
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107275970
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107275970
   Cul7 complex
     107275970
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107275970
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107275970
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 107275970
NCBI-ProteinID: XP_066159777
LinkDB
Position
8:17753348..17753857
AA seq 169 aa
MAATADNGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLVK
VVEYFKKHAAVTPKPATEAVVADKAKREEELKSFDAEFVDVDRTMLFELILAANFLNAQD
LLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFDN
NT seq 510 nt   +upstreamnt  +downstreamnt
atggcggcgacagcggacaacggcgaaaagatgatcctcctgatcagctcggacggtgag
cgttttgagctgtcggaggcggcagcgagtcagtcaaagacattatcccacatgatcgag
gatgactgcaccgataatggggttcccctccccaacgtcaccgccgtcgtcctcgtcaag
gtggtcgagtacttcaagaaacacgccgccgtcacccccaagccagccacggaagccgtc
gttgctgataaagcgaagagggaggaggagctcaagagctttgacgccgagttcgtcgac
gtcgacaggacgatgttgttcgagttgattttggccgcaaacttcttgaacgcgcaggac
ctgctagatctgacctgccagcacgcggcggacttgatcaaagacatgtcggtggaggag
gtcagggaggtgttcaacatcaccaacgacttcacgccagaggaggaggcggaggtccgt
aaagagaacgcttgggcttttgacaactag

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