Oryza sativa japonica (Japanese rice): 107275970
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Entry
107275970 CDS
T01015
Name
(RefSeq) SKP1-like protein 5
KO
K03094
S-phase kinase-associated protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03083
Polycomb repressive complex
osa04120
Ubiquitin mediated proteolysis
osa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107275970
04120 Ubiquitin mediated proteolysis
107275970
09126 Chromosome
03083 Polycomb repressive complex
107275970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
107275970
04121 Ubiquitin system [BR:
osa04121
]
107275970
03036 Chromosome and associated proteins [BR:
osa03036
]
107275970
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
107275970
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
107275970
Cul7 complex
107275970
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107275970
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
107275970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
107275970
NCBI-ProteinID:
XP_066159777
LinkDB
All DBs
Position
8:17753348..17753857
Genome browser
AA seq
169 aa
AA seq
DB search
MAATADNGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLVK
VVEYFKKHAAVTPKPATEAVVADKAKREEELKSFDAEFVDVDRTMLFELILAANFLNAQD
LLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFDN
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacagcggacaacggcgaaaagatgatcctcctgatcagctcggacggtgag
cgttttgagctgtcggaggcggcagcgagtcagtcaaagacattatcccacatgatcgag
gatgactgcaccgataatggggttcccctccccaacgtcaccgccgtcgtcctcgtcaag
gtggtcgagtacttcaagaaacacgccgccgtcacccccaagccagccacggaagccgtc
gttgctgataaagcgaagagggaggaggagctcaagagctttgacgccgagttcgtcgac
gtcgacaggacgatgttgttcgagttgattttggccgcaaacttcttgaacgcgcaggac
ctgctagatctgacctgccagcacgcggcggacttgatcaaagacatgtcggtggaggag
gtcagggaggtgttcaacatcaccaacgacttcacgccagaggaggaggcggaggtccgt
aaagagaacgcttgggcttttgacaactag
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