Oryza sativa japonica (Japanese rice): 107275975
Help
Entry
107275975 CDS
T01015
Name
(RefSeq) upstream activation factor subunit spp27
KO
K15223
upstream activation factor subunit UAF30
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
107275975
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
107275975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
SRP54_N
MTBP_C
Prothymosin
CDC45
Nop14
CCDC106
DUF2201_N
DUF5364
Motif
Other DBs
NCBI-GeneID:
107275975
NCBI-ProteinID:
XP_015633279
UniProt:
A0A8J8YCD7
Q10EQ6
LinkDB
All DBs
Position
3:join(32594036..32594394,32596597..32596711,32596842..32597013,32598503..32598574,32598653..32598816,32600763..32600885)
Genome browser
AA seq
334 aa
AA seq
DB search
MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLLSEVAG
KAEQEEAEVPKEEEPETGAEAAGGEPGGAEGEGEEEEEEEEEEEEEEEEEDSSGSRKKRR
SDGANTDGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRK
ILCDERLKKIFNVNSIDMFQMNKALTKHIWPLNSDGPVTSASPERSTPKEKPQKRERNEG
KKQKGGSSGSGSGFLVPLQLSDDLVKFIGTGESMLSRSDVVKRMWDYIKENKLQDPSDRR
KIICDEKLKDLLQVESFNGFTVSKLLAPHFTKTK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggactcggagctggtggagcggctgcgggaggtgctgcggtcgtccgacctc
aacaccaccaccaccgccatcctgcgccgccgcctcgaggaggacttcggcgtcgacctc
tccgacaagaagctcttcatccgcgagcaggtcgacctcctcctctccgaggtcgccggc
aaggccgagcaggaggaggcggaggtgcccaaggaggaggagcccgagaccggggcggag
gcagcgggtggagagccagggggcgctgaaggggagggggaagaagaggaggaggaagag
gaagaggaggaggaggaggaggaggaggaagacagtagcggcagccggaagaagcggcga
tcagatggagccaatactgatggcaagagaaaaggtggtggcttcaccaaattatgtagc
atttccccaacgcttcaagagtttgttggtgcctctgagttagctaggacagaggtagtc
aagaagctttgggcatatatccgagaaaataacttgcaagacccaagcaataagaggaag
attctgtgtgatgagagattgaagaagatcttcaatgtcaactccatcgatatgttccaa
atgaataaagcattgacgaaacacatatggccattgaattctgatggtcctgtgacctct
gcctcacctgagagatcaacacccaaagagaagcctcaaaagagagaaagaaatgaaggg
aagaagcaaaaaggtggttcttctgggtctggatctggttttcttgtgccccttcaactt
tcggatgatttagtgaaattcattggcactggtgagagtatgctttcgcgatctgatgtt
gtgaaaagaatgtgggactatataaaagagaataaattacaggatccttctgaccggagg
aaaataatatgtgacgagaagctgaaggatctattgcaagttgaatcattcaatggcttt
actgtttcgaagctgcttgctccccatttcaccaagacaaagtag
DBGET
integrated database retrieval system
