Oryza sativa japonica (Japanese rice): 107276048
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Entry
107276048 CDS
T01015
Symbol
CSLD4, OsCslD4
Name
(RefSeq) cellulose synthase-like protein D4
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00520
Amino sugar and nucleotide sugar metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
107276048 (CSLD4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
osa01003
]
107276048 (CSLD4)
Enzymes [BR:
osa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
107276048 (CSLD4)
Glycosyltransferases [BR:
osa01003
]
Polysaccharide
Structural polysaccharide
107276048 (CSLD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
Glyco_trans_2_3
zf-RING_4
Glyco_tranf_2_3
Glycos_transf_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107276048
NCBI-ProteinID:
NP_001412611
LinkDB
All DBs
Position
12:complement(join(23290809..23293476,23293729..23294708))
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AA seq
1215 aa
AA seq
DB search
MSRRLSLPAGAPVTVAVSPVRSPGGDAVVRRGSGLTSPVPRHSLGSSTATLQVSPVRRSG
GSRYLGASRDGGADESAEFVHYTVHIPPTPDRATASVASEAEAAAEAEEVHRPQRSYISG
TIFTGGLNCATRGHVLNFSGEGGATAASRAAASGNMSCKMRGCDMPAFLNGGRPPCDCGF
MICKECYAECAAGNCPGCKEAFSAGSDTDESDSVTDDDDDEAVSSSEERDQLPLTSMARK
FSVVHSMKVPGAAANGNGKPAEFDHARWLFETKGTYGYGNALWPKDGHAHSGAGFVAADE
PPNFGARCRRPLTRKTSVSQAILSPYRLLIAIRLVALGFFLAWRIRHPNPEAVWLWAMSV
ACEVWFAFSWLLDSLPKLCPVHRAADLAVLAERFESPTARNPKGRSDLPGIDVFVTSADP
EKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHG
VEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRVNSLPEAIRRRSDAYNAG
EELRARRRQQEEAAAAAAAGNGELGAAAVETAAVKATWMSDGSHWPGTWTCPAADHARGD
HAGIIQAMLAPPTSEPVMGGEAAECGGLIDTTGVDVRLPMLVYVSREKRPGYDHNKKAGA
MNALVRTSAIMSNGPFILNLDCDHYVHNSSALREGMCFMLDRGGDRVCFVQFPQRFEGVD
PSDRYANHNLVFFDVSMRAMDGLQGPMYVGTGCVFRRTALYGFSPPRATEHHGWLGRRKI
KLFLTKKKSMGKKTDRAEDDTEMMLPPIEDDDGGADIEASAMLPKRFGGSATFVASIPVA
EYQGRLLQDTPGCHHGRPAGALAVPREPLDAATVAEAIGVISCFYEEKTEWGRRIGWIYG
SVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN
NALFASPRMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLL
VITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTL
TSKPGNGGGDGGVGGEGNDDEAFAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSE
FPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINPP
AGARERIGGGGFSFP
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggctgtcgttgccggcgggggcgccggtgacggtggcggtgtcgccggtg
cggagcccggggggtgacgcggtggtgaggagggggagcgggctgacgtcccccgtgccg
aggcactcgctcgggtcgtccaccgccacgctgcaggtgtcgccggtgaggcggagcggc
gggagtaggtacctcggcgcgtcgagggatggcggcgccgatgagagcgccgagttcgtg
cactacaccgtgcacatcccgcccacgcccgaccgggcgacggcgtccgtggcgagcgag
gcggaggcggcggcggaggccgaggaggtgcaccggccgcagcggagctacatctccggg
acgatattcaccggggggctcaactgcgccacgcgcggccacgtgctcaacttctccggc
gagggcggcgccaccgccgcctccagggcggcggcgtcggggaacatgtcgtgcaagatg
cgcgggtgcgacatgcccgcgttcctcaacggcggccgcccgccgtgcgactgcgggttc
atgatctgcaaggagtgctacgcggagtgcgccgcgggcaactgccccggttgcaaggag
gccttctccgcgggctccgacaccgacgaatccgactccgtcaccgacgacgacgacgac
gaggccgtctcctcctccgaggagagggaccagctgccgctgacatccatggcgaggaaa
ttttccgtggtgcactccatgaaggtccccggcgccgccgccaacggcaacggcaagccg
gccgagttcgaccacgcccgctggctcttcgagaccaagggcacctatggctacggcaac
gctctctggcccaaggacggccacgcccatagcggcgccggcttcgtcgccgccgacgag
ccccccaacttcggtgcccgctgccgccgccccctcaccagaaaaaccagcgtctcccaa
gccattctcagcccctacaggttgttgattgcgattcggctggtggcgctggggttcttc
ctcgcgtggaggattcggcatccgaatccggaggcggtgtggctgtgggcgatgtcggtg
gcgtgcgaggtgtggttcgccttctcatggctgctcgacagcctccccaagctctgcccc
gtccaccgcgccgccgacctcgccgtcctcgccgagcggttcgagtcgccgacggcgcgc
aaccccaagggccgctccgacctccccgggatcgacgtgttcgtcaccagcgccgacccg
gagaaggagccgccgctggtcaccgccaacaccatcctctccatcctcgccgcggactac
cccgtcgagaagctcgcttgctacctctccgacgacggcggcgcgctgctgtcgttcgag
gcgctcgccgagacggccagcttcgcgcgcacgtgggtgccattctgccgcaagcacggc
gtcgagccgcggtgccccgaggcgtatttcggccagaagagggacttcctcaagaacaag
gtgcgcgtcgacttcgtccgcgagaggcggaaggtgaagcgcgagtacgacgagttcaag
gtgcgggtgaactcgctccccgaggcgatccggcggcgctccgacgcgtacaacgccggc
gaggaactgcgcgccaggaggcggcagcaggaggaggccgccgccgcggctgccgccggc
aacggcgagcttggagcggcggcggtcgagaccgccgccgtgaaggccacgtggatgtcg
gacggctcgcactggccggggacgtggacgtgccccgcggcggaccacgcccgcggcgac
cacgccgggatcatccaggcgatgctggcgccgccgacctcggagccggtgatgggaggc
gaggcggcggagtgcggcgggctgatcgacaccacgggcgtggacgtccgcctcccgatg
ctggtgtacgtgtcgcgggagaagcgcccgggctacgatcacaacaagaaggccggcgcc
atgaacgcgctggtgcggacgagcgccatcatgtcgaacgggcccttcatcctcaacctc
gactgcgaccactacgtgcacaactcgtcggcgctccgggaggggatgtgcttcatgctc
gaccgcggcggcgaccgcgtgtgcttcgtccagttcccgcagcggttcgagggcgtcgac
cccagcgaccggtacgccaaccacaacctcgtcttcttcgacgtgtccatgcgcgccatg
gacgggcttcagggccccatgtacgtcggcaccggctgcgtcttccgccgcaccgcgctg
tacggcttcagcccgccccgcgccaccgagcaccatggctggctcggccgcaggaagatc
aagctgttcctcaccaagaagaagagcatgggcaagaagacggacagggccgaggacgac
accgagatgatgctgccgccgatcgaggacgacgacggcggcgccgacattgaggcctcg
gctatgctaccgaagcggttcggcgggtcggcgacgttcgtggcgtcgatacccgtggcg
gagtaccagggtcggctgctgcaggacacccccgggtgccaccacggccgccctgcgggc
gcgctcgctgtgccgcgcgagccgctcgacgcggcgacggtggcggaggccatcggcgtg
atctcctgcttctacgaggagaagacggagtgggggcggcgcatcgggtggatctacggc
tccgtcaccgaggacgtggtcaccggctaccggatgcacaaccgcgggtggcgctccgtc
tactgcgtgacgccgcggcgcgacgcgttccgcggcacggcgccgatcaacctcaccgac
cgcctccaccaggtgctccggtgggcgacgggctccgtcgagatcttcttctcccgcaac
aacgccctcttcgcctcgccgcggatgaagctgctgcagcgcgtcgcctacttcaacgcc
gggatgtaccccttcacctccgtgttcctcctcgcctactgcctcctcccggccgtctcc
ctcttctccggcaagttcatcgtgcagcgactcagcgccaccttcctcgccttcctcctc
gtcatcaccctcaccctctgcctcctcgccctgctcgagatcaagtggtccgggatcacg
ctccacgagtggtggcgcaacgagcagttctgggtgatcggcggcaccagcgcgcacccg
gccgccgtgctgcagggcctactcaaggtgatcgccggcgtggacatctccttcacgctg
acctccaagccggggaacggcggcggcgatggcggggtcggcggcgaggggaacgacgac
gaggcgttcgcggagctgtacgaggtgaggtggagctacctgatggtgccgccggtgacg
atcatgatggtgaacgcggtggcgatcgcggtggcggcggcgaggacgctgtacagcgag
ttcccgcagtggagcaagctgctcggcggcgccttcttcagcttctgggtgctgtgccac
ctctacccgttcgccaagggcctcctcggccgccgcggccgcgtgcccaccatcgtcttc
gtctggtcgggcctcatctccatgatcatctccctcctctgggtctacatcaacccgccc
gccggcgcccgggagcgcatcggcggcggcggattcagcttcccatag
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