Oryza sativa japonica (Japanese rice): 107276500
Help
Entry
107276500 CDS
T01015
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107276500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
107276500
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107276500
Prokaryotic type
Archaeal type
TFB
107276500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
107276500
NCBI-ProteinID:
XP_025880257
LinkDB
All DBs
Position
3:4933093..4934019
Genome browser
AA seq
308 aa
AA seq
DB search
MCSVAGNEQCYCPECHRTTVVVVDHATGDTICTECALVLEERYIDETSEWRTFSDAGSGE
DRDPNRVGGCSDPFLSHAELGTVVAPAKRQAKDTASPPHVRVDSKSGQDSSLAVAFRAIS
DMADRLQLVATIRDRAKELFKKMEEAKLCARVRNRDAAYAACLHIACRNEGNPRTLKELA
SVMRDCQDKKEIGRMERIIRRHLGEEAGTAMEMGVVRAADYMSRFGSRLGMGKPEVREAQ
RAAQTLEDKLDVRRNPESIAAAIIYMVVQRAGAQTSARDVSKASGVAEATIKEACKELSQ
HEELLFSS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcgtcgccggcaacgagcagtgttactgcccggagtgccaccgcacgacggtg
gtggtggtggaccacgccaccggcgacaccatctgcaccgagtgcgcgctcgtcctggag
gagcggtacatcgacgagacctccgagtggcgcacgttctccgacgccggcagcggcgag
gaccgcgaccccaaccgcgtcggcggctgctccgaccccttcctctcgcacgcggagctc
ggcaccgtcgtcgcgccggccaagcggcaagcgaaggacaccgcctccccgcctcatgtg
cgcgtcgactccaagtcgggccaagacagctcgctggccgtcgcgttccgcgccatctcc
gacatggcggaccgcctccagctcgtggccaccatcagagaccgggccaaggagctgttc
aagaagatggaggaggcgaagctgtgcgccagggtgcggaaccgcgacgccgcgtacgcg
gcctgcctccacatcgcgtgccgcaacgagggcaacccgcggacgctgaaggagctcgcc
tcggtgatgcgcgattgccaggacaagaaggagatcgggaggatggagaggatcatcagg
aggcacctcggggaggaggccgggacggccatggagatgggcgtcgtgcgcgccgccgac
tacatgagccgcttcggctcgcggctcgggatgggcaagccggaggtgcgggaggcgcag
agggcggcgcagacgctggaggacaagctcgacgtgcggcgcaacccggagtccatcgcc
gctgcgatcatctacatggtggtgcagcgcgccggcgcccagacgtccgcgcgcgacgtg
tccaaggcctccggcgtcgccgaggcaaccatcaaggaggcctgcaaggagctgagccag
catgaagagctgctcttctcctcttaa
DBGET
integrated database retrieval system
