Oryza sativa japonica (Japanese rice) (RefSeq): 107276534
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Entry
107276534 CDS
T01015
Name
(RefSeq) syntaxin-related protein KNOLLE-like
KO
K08486
syntaxin 1B/2/3
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107276534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
107276534
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
107276534
Membrane trafficking [BR:
osa04131
]
SNARE
Syntaxin (Qa)
Stx-PM
107276534
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
107276534
Exosomal proteins of other body fluids (saliva and urine)
107276534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
VirB8
Motif
Other DBs
NCBI-GeneID:
107276534
NCBI-ProteinID:
XP_015619443
UniProt:
A0A0P0Y804
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Position
12:complement(4698235..4699698)
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AA seq
348 aa
AA seq
DB search
MCGYLIKSKFQPNNSTSPSPSSLIEKKWKKKSAFFVAPDLRDRSQQSPPIAPKMNDLMTD
SFVGAAAAAAAPLDRQDGGGGPGDQKLEAFLREAEAAKDEMAALRDELSRLQAAHEASKA
LLRPGAPRAATQAALVRLIGSAGRLRARLASMDRRAPAPATTAATAGLRGRLQDLTAGVQ
VLRRQVSAERRGDAARCYLAVAGEAPTEEQLDRLVAAGGANTDAEAAVRAAMKSSSEAEE
VEGGLLELQQLFLDMAALVESQGARVDDIERHVAAAAGDVGAAEGELREAQRLRVAARRR
RLWLSAGLAVLLLVVLAAAAAALALALARRKGGATQLAADAADLAAFL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggttatcttataaaatcaaaattccaaccaaacaactcgacctcgccgtcgccg
tcgtctttaatcgaaaagaaatggaaaaaaaagtcagcgttttttgttgccccagatttg
cgagatcgatctcagcaatctcccccaattgcgcccaagatgaacgatctcatgaccgac
tccttcgtcggcgcggccgctgcggcggcggcgccgctggatcggcaagacggcggcggg
ggtcccggcgaccagaagctcgaggcgttcctccgggaggcggaggccgccaaggacgag
atggcggcgctgcgcgacgagctgtcccgcctccaggccgcgcacgaggcgtccaaggcg
ctgctccgccccggcgcgccgcgcgccgccacgcaggccgcgctcgtccgcctcatcggc
tccgccggccgcctccgcgcgcggctggcgtccatggaccgccgcgcccccgccccggcc
accaccgccgccaccgccggcctgcgcggccgcctgcaggacctcaccgcgggcgtccag
gtcctccgccgccaggtctccgcggagcgccgcggcgacgcggcgcgctgctacctcgcc
gtcgccggggaggccccgaccgaggagcagctggaccggctcgtcgccgccggcggggcg
aacaccgacgccgaggcggcggtgcgggcggccatgaagtcctcctcggaggcggaggag
gtggagggcggcctcctcgagctgcagcagctgttcctcgacatggcggcgctggtggag
tcccagggcgcgcgcgtcgacgacatcgagcggcacgtggccgcggccgcgggcgacgtg
ggcgccgccgagggggagctgagggaggcccagcggctgcgcgtcgccgcgcggcggcgg
cgcctgtggttgtccgctggcctcgccgtgctgcttctcgtcgtcctcgccgcggcggcc
gccgcgttggcgctcgctctggcgcggcgcaagggcggcgcgacacagctcgccgccgac
gcggctgatctcgccgcgttcttgtga
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