Oryza sativa japonica (Japanese rice): 107276566
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Entry
107276566 CDS
T01015
Name
(RefSeq) putative autophagy-related protein 8E
KO
K08341
GABA(A) receptor-associated protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107276566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
107276566
04121 Ubiquitin system [BR:
osa04121
]
107276566
03029 Mitochondrial biogenesis [BR:
osa03029
]
107276566
Membrane trafficking [BR:
osa04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107276566
Ubiquitin system [BR:
osa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
107276566
Mitochondrial biogenesis [BR:
osa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107276566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
107276566
NCBI-ProteinID:
XP_025879248
LinkDB
All DBs
Position
2:complement(join(19901146..19901237,19901327..19901445,19901516..19901595))
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AA seq
96 aa
AA seq
DB search
MLVVSMLSGHSVDKFSRSNLPEMEKRKYLVPCNMPVGHFIFILHSRLHLPPGTALFVFVN
NTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctagtagtatccatgttgtcaggtcattctgttgataaattttcgaggagtaatctt
ccagaaatggagaagcgcaagtacctggttccatgtaacatgccagttgggcactttatt
ttcatacttcattccaggctacatttgcctccaggaacagcgttgtttgtgtttgtcaac
aacactttgccccagactgctcagctgatgggcagtgtgtatgagtcatacaaagatgag
ggcgatggcttcctctacttgtgctacagcagcgagaagacattcggttga
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