KEGG   Oryza sativa japonica (Japanese rice): 107277129
Entry
107277129         CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107277129
   04120 Ubiquitin mediated proteolysis
    107277129
  09126 Chromosome
   03083 Polycomb repressive complex
    107277129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    107277129
   04121 Ubiquitin system [BR:osa04121]
    107277129
   03036 Chromosome and associated proteins [BR:osa03036]
    107277129
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107277129
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107277129
   Cul7 complex
     107277129
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107277129
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107277129
SSDB
Motif
Pfam: Skp1 Skp1_POZ CobS_N
Other DBs
NCBI-GeneID: 107277129
NCBI-ProteinID: XP_015611089
UniProt: A0A0P0XKN1 A3BWR9
LinkDB
Position
9:complement(9903224..9903727)
AA seq 167 aa
MASAAVAADGAADGKKMILLVSSDGVKFELSEAAASLSKTLGNMIEDDCATNGAIPLANV
AADILAMVVEYCNRHAAAAANASGQEELIRKFDAEFVNIDRKKLFGLINAANFLNMPCLL
ELTCQRTADLIKDMMPEQVREVFGIENDFTPEEEAEVRNENAWAYEM
NT seq 504 nt   +upstreamnt  +downstreamnt
atggcatcggcagcagtagcagcagacggcgccgccgacggcaagaagatgatcctgctc
gtcagctcggacggcgtgaaattcgagctgtcggaggcggcggcgagcttgtccaagacg
ctgggtaacatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtc
gccgccgacatcctcgccatggtggtcgagtactgcaacaggcacgccgccgccgccgcg
aatgctagcgggcaggaggagctcatcaggaagttcgacgccgagttcgtcaacatcgac
aggaagaagttgttcggcctgatcaatgctgccaacttcctgaacatgccgtgcctgttg
gagctgacatgccagcgcacggcggacttgatcaaagacatgatgccggagcaggtcagg
gaggtatttgggatcgagaacgacttcacgccggaggaggaggccgaggtccgtaacgag
aacgcctgggcctatgagatgtag

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