Oryza sativa japonica (Japanese rice): 107277129
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Entry
107277129 CDS
T01015
Name
(RefSeq) SKP1-like protein 5
KO
K03094
S-phase kinase-associated protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03083
Polycomb repressive complex
osa04120
Ubiquitin mediated proteolysis
osa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107277129
04120 Ubiquitin mediated proteolysis
107277129
09126 Chromosome
03083 Polycomb repressive complex
107277129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
107277129
04121 Ubiquitin system [BR:
osa04121
]
107277129
03036 Chromosome and associated proteins [BR:
osa03036
]
107277129
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
107277129
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
107277129
Cul7 complex
107277129
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107277129
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
107277129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
CobS_N
Motif
Other DBs
NCBI-GeneID:
107277129
NCBI-ProteinID:
XP_015611089
UniProt:
A0A0P0XKN1
A3BWR9
LinkDB
All DBs
Position
9:complement(9903224..9903727)
Genome browser
AA seq
167 aa
AA seq
DB search
MASAAVAADGAADGKKMILLVSSDGVKFELSEAAASLSKTLGNMIEDDCATNGAIPLANV
AADILAMVVEYCNRHAAAAANASGQEELIRKFDAEFVNIDRKKLFGLINAANFLNMPCLL
ELTCQRTADLIKDMMPEQVREVFGIENDFTPEEEAEVRNENAWAYEM
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggcagcagtagcagcagacggcgccgccgacggcaagaagatgatcctgctc
gtcagctcggacggcgtgaaattcgagctgtcggaggcggcggcgagcttgtccaagacg
ctgggtaacatgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtc
gccgccgacatcctcgccatggtggtcgagtactgcaacaggcacgccgccgccgccgcg
aatgctagcgggcaggaggagctcatcaggaagttcgacgccgagttcgtcaacatcgac
aggaagaagttgttcggcctgatcaatgctgccaacttcctgaacatgccgtgcctgttg
gagctgacatgccagcgcacggcggacttgatcaaagacatgatgccggagcaggtcagg
gaggtatttgggatcgagaacgacttcacgccggaggaggaggccgaggtccgtaacgag
aacgcctgggcctatgagatgtag
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