KEGG   Oryza sativa japonica (Japanese rice): 107277261
Entry
107277261         CDS       T01015                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K12831  splicing factor 3B subunit 4
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107277261
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    107277261
Spliceosome [BR:osa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107277261
 Complex B
    107277261
 Complex C
   U2 SnRNP specific factors
    107277261
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 107277261
NCBI-ProteinID: XP_015621556
UniProt: Q5N8W6
LinkDB
Position
1:join(38661594..38661627,38662429..38662640,38662948..38663149,38663242..38663408)
AA seq 204 aa
MARNPTRTVYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCPKGYAFAEYETEEI
AQYAVQLFSGLVRLYGKTLKFAISGQDKPSSNGNNPVMPKLNPVPLPKQPQFVHHSDMHV
LHTPADPMVNGGTRDYGFSNYYPYSANPQALPVGPVHSYRGFSNGTYDCSTCIFGSIVNG
RYGDYVLNAAGHGAPRQPMLYPSY
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcgaggaaccctacccgcaccgtctacataggtaacttggatgaaaaggtaactgaa
agaatattgtatgagattcttattcagccaggtcgtgtagtagacctatgcatacctcgt
gacaaggaaactagttgtcccaaaggttacgcttttgctgagtatgaaacagaggaaatc
gcacagtatgctgttcaacttttttcaggacttgttcggctttatggtaaaacactcaaa
tttgcgatctctggacaagacaaaccctcatcaaatggcaataatccagtaatgcctaaa
ctcaatcctgtaccattaccaaagcagcctcagtttgtgcatcatagtgatatgcatgta
ttgcataccccagcggatccaatggtaaatggtgggacaagagattatggcttttcaaac
tattatccttatagtgctaatccccaagcattaccagttggacccgtgcatagctacaga
gggttcagcaatggtacgtatgattgcagtacatgcatatttggttctattgttaatggt
aggtatggagattatgttttgaatgctgctggccatggagctccgaggcaaccaatgttg
tatccgtcctactag

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