Oryza sativa japonica (Japanese rice): 107277483
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Entry
107277483 CDS
T01015
Name
(RefSeq) transcription factor TCP21
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107277483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
107277483
Transcription factors [BR:
osa03000
]
Eukaryotic type
Other transcription factors
TCP
107277483
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Ortholog
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GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
107277483
NCBI-ProteinID:
XP_015629543
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All DBs
Position
3:join(18054133..18054424,18054477..18054662,18056416..18056441)
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AA seq
167 aa
AA seq
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MPCHIHGGAALDKQLVPTASKANGTTLAVRKPPSKDRHSKVDGRGRRVRMPIICAARVFQ
LTRKLGLKSDGQTIEWLLREAEPSIIGATGTGTTLASYHTTSPSPTLASDAPVEGFWVLS
AGADFGQFWSFAAVREMMAATAAPAMLGEAFAASVGNYLYLTVSSNK
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtcatatccatggcggcgccgctctggacaagcaactcgtccccaccgcctcc
aaagccaatggcaccaccctcgctgtccgcaagcctccctccaaggaccgccatagcaag
gtcgacggccgcggccgccgcgtccgcatgcccatcatctgcgctgcccgtgttttccag
ctcacccgcaagcttggcctaaagtccgacggccagactatcgagtggctcctccgcgag
gctgagccatccatcattggcgccactggcaccggcaccaccctagcctcctaccacacc
acctccccctcgcccactcttgcttctgacgcccccgtcgagggcttctgggtgctctcc
gcaggggctgacttcggccaattctggagctttgcggccgtgcgggagatgatggccgcc
accgcggcgcccgccatgcttggggaggccttcgccgccagtgttggcaactacctctat
ttgactgtttcttccaataagtga
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