KEGG   Oryza sativa japonica (Japanese rice): 107277488
Entry
107277488         CDS       T01015                                 
Name
(RefSeq) phospholipase D zeta 1 isoform X1
  KO
K01115  phospholipase D1/2 [EC:3.1.4.4]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00564  Glycerophospholipid metabolism
osa00565  Ether lipid metabolism
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09103 Lipid metabolism
   00564 Glycerophospholipid metabolism
    107277488
   00565 Ether lipid metabolism
    107277488
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107277488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    107277488
Enzymes [BR:osa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.4  phospholipase D
     107277488
Membrane trafficking [BR:osa04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Phospholipases
    107277488
 Endosome - Golgi transport
  Others
   Others
    107277488
SSDB
Motif
Pfam: PLDc PLDc_2 PH PH_9 PH_8
Other DBs
NCBI-GeneID: 107277488
NCBI-ProteinID: XP_066166925
LinkDB
Position
5:complement(join(17149022..17149271,17149346..17149407,17149667..17149732,17150191..17150322,17150510..17150611,17150731..17150928,17150994..17151140,17151389..17151499,17152246..17152779,17152854..17153010,17153096..17153245,17153329..17153468,17154253..17154369,17154456..17154695,17155344..17155517,17155605..17155772,17155908..17156049,17156195..17156313,17157582..17157683,17159428..17159727))
AA seq 1136 aa
MNVERLVPGGAGGGGGRFRYERMPARGPADDGEGEEEEEEAAVPERRPEVLAASASFRLS
EAARVFEELPRASIVAVSRPDAGDITPMLLSYTIEVHYKQFRWRLYKKASQVLYLHFALK
RREFLEEFHEKQEQVKEWLQNLGIGEHMPVGHDEDEADDVNVPAQAEENSIRHRNVPSSA
VLPVIRPALGRQHSVSDRAKVAMQEYLNHFLGNLDIVNSPEVCKFLEVSCLSFLPEYGPK
LKEDYVSVGHLPKIQKDHKENCCSCGLFSCCKSSWQKVWVVLKPGFLALLKDPFDPKLLD
VLIFDALPHMDISGEGQISLAKEIKERNPLHFGLQVSSGGQTLKLRTRSSSKVKDWVSAI
NAARQTPEGWCYPHRFGSFAPPRGLMPDGSMVQWFIDGEAAFQAIASSIEQAKSEIFITG
WWLCPELFLRRPFQHHGSSRLDALLEARAKQGVQIYILLYKEVALALKINSLYSKQKLLN
IHENVKVLRYPDHFSSGVYLWSHHEKIVIVDNQVCYLGGLDLCFGRYDNSAHKLSDVPPV
IWPGKDYYNPRESEPNSWEDTMKDELDRTKYPRMPWHDVQCALYGPPCRDVARHFVQRWN
YAKRNKAPNEQGIPLLMPHHHMVIPHYKGIGQEINSEADGKQNHDKDCDVKKPVSVDSRE
SCQDIPLLLPQELEPPALPNGDLRVNDLDANHSDHLHKTSFNQPLLNRKAKLDSSRQDLP
MRGFVDNISSLESSSIRHFDSSKEEKYHMDKNWWEMQERGDQVASVLDIGQVGPRATCHC
QVIRSVGQWSAGTTQIEGSIHNAYFSLIEKAEHFVYIENQFFISGLSGDETIKNRVLEAL
YRRILRAEREKKRFKAIIIIPLLPGFQGGIDDGGAASVRAIMHWQYRTICRGPNSILQNL
YDVIGPKAHDYISFYGLRAHGRLCEGGPLVTNQIYVHSKLMIIDDRITLIGSANINDRSL
LGSRDSEIAVVIEDKEVVSSKMNGKPWEAGKFSLSLRLSLWAEHLGLHRGEVSHIMDPID
DSTFKNIWMATAKTNTMIYQDVFSCVPNDLIHSRAQFRQSFAHCRDKIGHNTIDLGVAQE
KLETYQDGDLKGTDPIERLQMIKGHLVSFPLDFMSQEDLRPYFSESEYYTSPQVFH
NT seq 3411 nt   +upstreamnt  +downstreamnt
atgaacgtggagcgcctcgtccccggcggcgccggcggcggcggcggccgcttccggtac
gagcggatgccggctaggggcccggcggatgacggggagggggaggaggaggaggaggag
gcggcggtgccggagcggcggccggaggtcctggcggcgtcggcgtcgttccgcctctcg
gaggcggcgcgggtgttcgaggagctccccagggcgtcgatcgtcgccgtgtcgcgcccc
gacgccggggacatcaccccgatgctgctgtcgtacaccatcgaggtgcactacaagcag
tttaggtggcgtctatataagaaagcttcacaagttctctatctacattttgcattgaag
aggcgtgaatttcttgaagaattccatgagaagcaagaacaggtcaaagagtggctccaa
aatctgggaattggggagcacatgccagtaggacatgatgaggatgaagcagacgatgtg
aatgttcctgcacaggctgaagaaaactccattagacatagaaatgttccttcaagtgct
gttttgcctgtcattcgaccagctctggggcgtcaacactcagtttctgatcgagcaaaa
gttgccatgcaagaatatctgaaccattttttggggaacttggacattgtcaactcaccg
gaggtttgcaaatttttggaggtatcatgtttgtcatttttaccggaatatgggcctaag
ctaaaggaagattatgtatctgttggacacttgccaaaaattcagaaggaccataaagaa
aactgttgttcatgtgggttgtttagctgttgcaaaagcagctggcaaaaggtttgggtt
gtcctgaagccaggattcttagctttactcaaagatccttttgatccaaagcttttagat
gtccttatctttgatgcactgccacatatggatataagtggagagggccaaatatctcta
gcaaaagagatcaaggaacgaaacccgttgcatttcggactccaggtgtcttctggtggc
cagactttaaagttacgaacaagaagttcttctaaagtgaaagactgggttagtgcaata
aatgctgctcgacaaactccagagggctggtgttaccctcatcgttttggttcatttgct
ccaccaaggggtctcatgccagatgggagtatggtacagtggtttatagacggagaagct
gcatttcaggcaattgcttcctccattgagcaagcaaaatcagagatatttattactggc
tggtggctctgcccagaattgtttctccgacgccctttccaacatcatgggtcatctagg
cttgatgctctactggaagctagagctaagcagggtgtacagatctacattcttttgtac
aaggaagttgctcttgcattgaaaatcaacagcttgtacagtaaacaaaagctacttaac
attcatgagaatgtaaaagttctgcgatatcctgatcatttctcaagcggtgtatactta
tggtcacaccatgagaaaattgtgatagtagataatcaagtatgctatcttggaggtctt
gatctgtgctttggtcgctacgataattctgcgcacaaactttcagatgttcctcctgtg
atatggccagggaaagactactataaccccagggaatctgagccaaattcctgggaggac
acaatgaaagatgagctggaccgaacgaaatatcctcgcatgccttggcatgatgttcag
tgtgctctctacggtccaccttgtcgggatgttgcaaggcattttgttcagcgctggaat
tatgcaaagaggaacaaagctcccaatgagcaaggaattcccttgctgatgcctcatcac
cacatggtaattccacattacaagggcataggccaagaaattaatagtgaggctgatggt
aaacaaaatcatgacaaggattgtgatgttaaaaaaccagtctctgtggactcacgggag
tcttgtcaggacattccattgcttttacctcaagagcttgaaccaccggcattgcccaat
ggagatttaagagtgaacgatttagacgccaaccactctgatcacctacacaaaacaagc
ttcaatcagcctttgctcaaccggaaggcaaagttggattcttcccgacaggatttgccc
atgagaggtttcgtagacaatataagttcccttgagtcatcatctattaggcattttgat
tcttccaaagaagaaaagtatcacatggataagaactggtgggagatgcaagaaagagga
gatcaagttgcttcagtacttgatatagggcaagttggtccaagggcaacttgtcattgt
caggtaattagaagtgttggtcaatggtcagctggaaccactcaaatcgaaggaagcatc
cacaatgcctatttttctcttattgaaaaggcagaacattttgtatatatcgagaatcaa
tttttcatatcaggcctttcaggagatgaaacgataaaaaatcgtgtattggaagcatta
tacaggcgcatacttcgggcagagagagaaaaaaagcgcttcaaagccatcataataata
cctctgttacctggttttcagggaggcattgatgatggcggagctgcatctgtgagagca
attatgcattggcaataccggactatctgtagaggccctaattctatacttcagaatcta
tatgatgttattggtccaaaagcacatgattatatctcattttatggtcttagagcacat
ggtagactatgcgaaggaggtcccttggtcactaatcagatttatgtccacagtaagttg
atgataattgatgaccgcatcacattgattggatcagctaacataaatgatagaagcttg
cttggatcaagagattctgagattgccgtggtcattgaagataaagaagttgttagttcc
aaaatgaatggaaaaccttgggaagctgggaagttttctctaagcctacgtctctctctc
tgggcagagcaccttggccttcatcgaggagaggtcagccatattatggaccctatcgat
gactcaactttcaaaaatatctggatggccactgctaagacaaataccatgatttaccaa
gatgtcttctcatgtgtacctaatgatcttatccattcaagggcccaatttcggcagagc
tttgctcactgcagggataaaatcggtcacaatacaatcgatttgggggttgcccaagag
aagctggaaacctaccaggacggcgatctcaagggtacggaccctatagaaagattgcag
atgatcaaaggtcaccttgtttctttcccgttggatttcatgtcccaagaggacttgaga
ccatatttcagtgaaagtgaatattatacgtctccacaagttttccattag

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