Oryza sativa japonica (Japanese rice): 107277922
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Entry
107277922 CDS
T01015
Name
(RefSeq) chaperone protein ClpC4, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
osa03110
]
107277922
Chaperones and folding catalysts [BR:
osa03110
]
Heat shock proteins
HSP100
107277922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
Mg_chelatase
TniB
AAA_14
nSTAND3
AAA_18
AAA_28
NACHT
IstB_IS21
NBD_SMAX1
RNA_helicase
RsgA_GTPase
Zeta_toxin
AAA_25
Torsin
UVR
ARM_KDM8_N
Motif
Other DBs
NCBI-GeneID:
107277922
NCBI-ProteinID:
XP_025876965
LinkDB
All DBs
Position
11:complement(join(9768007..9769134,9769570..9769665,9769762..9769837,9770321..9770538,9770694..9770909,9771327..9771512,9771598..9771699,9771819..9772205))
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AA seq
802 aa
AA seq
DB search
MQIPEFTPGTGLRSTNAIQRTTEVLQRHSHVGLRQPHAGRLREMHTASGRPVIGLTPTIV
SQKTTKVPKQPRFVARAIDNFSREVMNAIAVAHDEAQYIAHLTIGSTNILLSLISQYICI
FLLEIILNKAYKMFRAAVRRATRGAKLATLMEYGTNLTKLAEEGKLDPVVGRQKQIDHVV
QILSRRTKNNPCLIGEPGVGKTAIAEGLAQLIATGDVPETIQQKTVISLDMGLLLAGTKY
RGELEERLKNILEEIKQNGEIILFLDEVHTLVTAGSAEGAIDAANIFKPALARGELQCIG
ATTINEYRKHIEKDAALERRFQPVKIPESTVDETVGILKGLRERYQGHHKVQYTDEALVA
AAELSHKHIRDRFLPDKAIDLMDEAGSIVRLRNAQCKPSKKVNDLEAELKKTLKEKNDAI
SIQNFRRAKQLRDHELQLRTNISALTDKKTQMMEPDAIAMPVVTEDDVRHAISRWTGVPL
HKVSMDESRKLLKLEEALHRRVVGQGEAVAAVSRAIRRARLGLKHPGRPVASLVFAGPTG
VGKSELAKALAAYYYGSSESEEAAMVRLDMSEYMEKHAVARLVGSPPGYVWHGEGGQLTE
AVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLTDGKGRTVDFKNTLIVMTTNIGSSL
IVNNGGDGAAAAGRIKNTVTDEMKRHFRPEFLNRLDEVIMFQPLTELEVGKIAGIMLEEF
AGRVREKGIKLKVTDKFRELVVEEGFDPSYGARPLRRAVVRLLEDTLAEKMLAGEVREGD
SVIVDADSAGNAVVRRSNAMPA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccctgaatttacacctggcactggcttgagatcaaccaatgcgattcagaga
acaacagaagtactgcagagacattctcatgttggtctaaggcagccacatgctggtcgt
ctaagagaaatgcatacagcttcaggtaggcctgtcattggcttgacaccaaccattgtg
tctcagaagacaaccaaagtgccgaaacagcctcgtttcgtcgccagggcgattgataat
ttcagcagggaggtgatgaatgctatcgcggttgcacacgacgaagctcaatacattgca
catctcacaatcgggagcacgaacatcctgcttagcctcatttcacagtacatttgcatt
ttcctcctggaaatcatactcaataaggcttacaaaatgttcagagctgctgttaggaga
gcaaccaggggagctaagttagccacacttatggagtatgggactaatctaacaaaatta
gcagaggagggtaaattggaccctgttgtcggaaggcagaagcagattgatcatgtcgtc
cagattctgagcagacggacaaagaacaacccttgcctgatcggagagcctggtgttgga
aaaacagcaatcgcagaagggcttgctcagctcattgccacaggggacgttcctgaaaca
attcaacagaaaacggttatctcacttgacatgggacttcttcttgctggtacgaaatat
cgaggagagttggaagaaagactgaagaatatcttggaagaaatcaagcagaacggtgaa
ataatactattccttgacgaagtccacactctagtaacagcaggatcagcagaaggtgct
attgatgctgctaatatttttaagccagcactggcaagaggtgaactacagtgtattgga
gccactacaattaatgaatacaggaagcacatcgagaaagatgctgcattagaaaggcgc
ttccaacctgtaaaaattccagagtcaacagttgatgagaccgtaggaattctgaaagga
cttcgagagagatatcagggtcatcacaaggtccaatacactgatgaagcccttgttgca
gctgctgaactctcccataagcacatcagagatcgttttctccctgacaaagccattgat
ctgatggatgaagcaggttcgatcgtcaggctaagaaatgcccagtgtaaaccatcgaag
aaggttaatgatttggaggcagagctcaagaaaaccttgaaggagaagaatgatgccatc
agcatacagaacttcagaagggcaaagcagcttcgcgatcatgagctgcagctcaggacc
aacatctcagctctaactgacaagaaaacgcagatgatggagccagacgccattgccatg
ccagtggtcaccgaagacgacgtccggcacgccatctcaaggtggaccggcgtcccattg
cacaaggtgtccatggacgaatcaagaaagctcctcaagctggaggaggccctgcatcgc
cgcgtcgtcggccagggcgaggcggtggcggcggtcagccgcgccatccgccgcgcccgc
ctcggcctcaagcaccccggccggcccgtcgcgagcctcgtgttcgccgggccaaccggc
gtcggcaagtcggagctcgccaaggcgctcgcggcgtactactacggctcgtcggagtcg
gaggaggcggccatggtgcggctcgacatgagcgagtacatggagaagcacgcggtggcg
aggctggtcggctcgccgccggggtacgtctggcacggcgagggtggccagctgacggag
gcggtgcgacggcggccgcacgcggtggtgctgctcgacgaggtcgagaaggcgcaccgc
gacgtgttcgacctgctgctgcaggtgctcgacgacggccgcctcaccgacgggaagggg
aggacggtggacttcaagaacacgctcatcgtcatgacgaccaacatcggcagcagcctc
atcgtcaacaacggcggcgacggcgccgccgccgccgggaggatcaagaacacggtgacc
gacgagatgaagcgccacttccggcccgagttcctgaaccggctggacgaggtgatcatg
ttccagccactgaccgagctcgaggtcgggaagatcgccgggatcatgctggaggagttc
gccgggagggtcagggagaaggggatcaagctgaaggtgacggacaagttcagggagctc
gtcgtggaggagggattcgacccgagctacggcgcgaggccgctgaggcgggccgtcgtg
cggctgctggaggacaccctcgcggagaagatgctcgccggagaggtcagagaaggggat
tcggtgatcgtcgacgccgattcagctgggaatgccgtggtcaggaggagcaacgccatg
cctgcctag
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