KEGG   Oryza sativa japonica (Japanese rice): 107278090
Entry
107278090         CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107278090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osa03021]
    107278090
Transcription machinery [BR:osa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     107278090
 Prokaryotic type
  Archaeal type
    TFE
     107278090
SSDB
Motif
Pfam: TFIIE_alpha Rrf2 Zn_ribbon_SprT Sgf11 Zn_ribbon_IS1595 Dimerisation DpnI
Other DBs
NCBI-GeneID: 107278090
NCBI-ProteinID: XP_066162506
LinkDB
Position
12:join(1716377..1716402,1716522..1716638,1717790..1717911,1719129..1719256,1719941..1720050,1732978..1733161,1733813..1733998,1734276..1734494,1734603..1734816,1735387..1735475,1737042..1737260)
AA seq 537 aa
MASMEPLNRMVRMVARAFYDNVSLARDPKSARGDNCGLAVVVLDALTRRRQWVREEDLAK
ALKISSKQLRRILQFFEEEKLVRRCHRKESPKGVNISNNVSGTAGDVHPFTKGGEKAKMH
THSYCCLDYAQVYDVVRHRIHRMRKKLKDELDDRDTVQHYVCPNCKRRYSAFDALQLVSD
MDDYFHCEHCKEQLLPESEKLTLDEVVCGGDNAIKHKHDKLKDMQQRMEEQLKPLIAVLD
RVKDLPFPSFMSLQDWERATMEASANGAVGSSQNSEGRYSSKPMPFLGETEVEVNFLGST
GAQEGVESGMESIKPQPSWMNRKSTVLTGEHKGEISNTADLDQSSEAKSDKKQLSEKDEM
KSIQEAYAKAYYEAIQKRQEDEDKRMIQEESLTCISDQPFASDAQFERRLGAKSKRDDGG
DSGDDGIEMKVEQPTGNIGEVYKLADLDVETQESIDDDDDDDLVWRLLSLSLRKMQRSWK
LWKQGVVLSKSLSLKSLRHTAHVSSLASAALVGTRLRRRSSDTVPTRRARLHGGGGG
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggcctccatggagcccttgaaccggatggtgaggatggtggcgcgcgcattctacgac
aacgtctcgctggccagagaccccaagtccgctcgcggcgacaactgtgggcttgccgtc
gttgtcctcgacgccctcaccaggcggcgccagtgggtccgagaggaagatttggctaaa
gcattaaagatttcctctaagcaactgcgccgcattctccagttttttgaagaagagaag
ctagtgagaagatgtcatcggaaggagtcaccaaaaggagtaaacatatctaacaatgtc
tctggcaccgctggtgatgtgcatccttttactaaaggaggagagaaagcaaagatgcac
acacattcctactgttgtttggactatgctcaggtatatgatgttgtaagacataggata
caccgcatgaggaaaaaattaaaagatgagttagatgacagagatacagttcagcattat
gtatgtcctaactgtaaaagaaggtattcagcatttgatgcactgcaacttgtaagcgat
atggatgactattttcactgtgagcattgcaaagaacaacttcttccagaaagtgaaaag
cttactttggatgaagttgtgtgtggtggtgacaatgcaataaagcataagcacgataaa
ctaaaggatatgcagcaaagaatggaggagcaattgaagccattaatagcagtacttgac
agggtaaaggatcttccttttccatcttttatgagtttgcaagattgggaaagagcaact
atggaggcatctgcaaatggtgcagttggttcatctcagaattcagaagggcgatacagc
agtaaaccaatgcccttccttggggaaacagaggttgaagttaatttcttaggaagtact
ggagcacaggaaggtgttgaatctggtatggaaagtataaagccacagccctcatggatg
aatcgtaagagtacagtcctcacaggggaacataaaggagaaatcagcaacactgcagat
ctggatcaaagttcagaagccaagagtgacaagaaacagctctcagagaaagatgagatg
aagagcatacaggaggcatatgcaaaagcttattatgaggctatccagaaaaggcaggaa
gatgaggacaaaaggatgatacaagaagaaagccttacatgtatttctgaccagccattt
gcttctgatgcacagtttgagaggcggttgggtgccaaatcaaaacgtgatgatggtggt
gactctggtgatgatggcattgaaatgaaagtggagcaaccaacagggaatataggagag
gtatataagttggctgatctggatgtggagacccaagaatcaattgatgatgatgatgat
gatgatcttgtttggaggctgctatccttgagcctacggaagatgcagcgctcatggaag
ctgtggaagcagggcgtcgtcctcagcaagtctctctccttgaagtccctcaggcacacg
gcgcacgtctcctccctcgcgtcggccgccctcgtagggaccaggctcaggaggagatcg
agcgacaccgtgcctactcgtcgagcgcgcttgcacggcggcggcggcggctga

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