KEGG   Oryza sativa japonica (Japanese rice): 107278210
Entry
107278210         CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 13
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107278210
   04120 Ubiquitin mediated proteolysis
    107278210
  09126 Chromosome
   03083 Polycomb repressive complex
    107278210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    107278210
   04121 Ubiquitin system [BR:osa04121]
    107278210
   03036 Chromosome and associated proteins [BR:osa03036]
    107278210
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107278210
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107278210
   Cul7 complex
     107278210
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107278210
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107278210
SSDB
Motif
Pfam: Skp1_POZ MTTB CC_BshC DUF932 Neur_chan_memb
Other DBs
NCBI-GeneID: 107278210
NCBI-ProteinID: XP_015646266
UniProt: A0A0P0X8X2 A3BMD0
LinkDB
Position
7:26124356..26125021
AA seq 221 aa
MAEEKGKAVMPMEVDQVEDEREAETVVEAVQKAVYDALEKVEMMEEEGEAAVAEAADKLL
EEAVEKAVTEALEEAGWDAAEKALSDDLEKVSLEAESARMITLESSDGEVVKVKEASARL
SKTIGNIIDDGRGDEAIPLPDVSYKTLKKVVEYCDKHADEKSDTDEQKEELKNWDKAFID
ELAEDDDSLVKVIMASNYLKIDGLHNLASQCKTTREQIGKA
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcggaggagaaggggaaggcggtgatgccgatggaggtggatcaggtggaggacgag
agagaggccgagacggtggtggaggcggtgcagaaggcggtgtacgatgctttggagaag
gtggagatgatggaggaggagggagaggccgcggtggcggaggcggcggataagttgcta
gaggaggcggtggagaaggcggtgacggaggcgttggaggaggcggggtgggacgcggcg
gagaaggcgttgtccgatgatttggagaaggtctcgctggaggcggagagcgctaggatg
atcaccctcgagagctccgacggcgaggtggtcaaggtgaaggaggcgtcggcgaggctg
tccaagaccatcgggaacatcatcgatgacggccgcggcgacgaggccatcccgctcccg
gacgtcagctacaagaccctcaagaaggtggtcgagtactgcgacaagcacgccgacgag
aagtccgacaccgacgagcagaaagaggagctcaagaactgggacaaggccttcatcgac
gagctggccgaggacgacgactccctcgtcaaggtcatcatggcctccaactacctcaaa
atcgatggactccacaacctcgcctcccagtgcaagaccacccgcgagcagatcggcaag
gcctga

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