Oryza sativa japonica (Japanese rice): 107278737
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Entry
107278737 CDS
T01015
Name
(RefSeq) SKP1-like protein 4
KO
K03094
S-phase kinase-associated protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03083
Polycomb repressive complex
osa04120
Ubiquitin mediated proteolysis
osa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107278737
04120 Ubiquitin mediated proteolysis
107278737
09126 Chromosome
03083 Polycomb repressive complex
107278737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
107278737
04121 Ubiquitin system [BR:
osa04121
]
107278737
03036 Chromosome and associated proteins [BR:
osa03036
]
107278737
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
107278737
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
107278737
Cul7 complex
107278737
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107278737
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
107278737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
DUF7362
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
107278737
NCBI-ProteinID:
XP_015645851
UniProt:
A3BGJ0
LinkDB
All DBs
Position
7:2298226..2298699
Genome browser
AA seq
157 aa
AA seq
DB search
MIILISADGKRFEVTEAVASQSQLISNMIEDDCTENGVRLPNVDGDILTMVVDYCNMHAG
DAAAAGDTMKASSTEEELKKFDAELVQALENPVLFKLILAANFLNIKSLLDMTCQRVADM
MSGKTPEQMRETFSIENDFTPEEEAAIRQENAWAFDD
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcctgatcagcgccgacgggaaacgcttcgaggtgacggaggcggtggcgagc
caatcgcagctgatatccaacatgatcgaggacgattgcacggagaacggggtgcgtctc
cccaacgtcgacggcgacatcctcaccatggtcgtcgactactgcaacatgcacgccggc
gacgccgccgccgccggcgacaccatgaaagcatcaagcacggaggaggagctgaagaag
ttcgacgccgagttggtgcaagccctcgagaatccggtgctgttcaagctgatcttggcg
gccaatttcttgaacatcaagagcttgctggacatgacgtgccagcgcgtggcggacatg
atgtccggcaagacgccggagcagatgagggagacgttttcgatcgagaacgacttcacg
ccggaggaggaggcggcgattcgccaggagaacgcctgggccttcgacgactag
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integrated database retrieval system