Oryza sativa japonica (Japanese rice): 107279829
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Entry
107279829 CDS
T01015
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
osa01009
]
107279829
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
107279829
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
osa04040
]
107279829
Protein phosphatases and associated proteins [BR:
osa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107279829
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
107279829
Ion channels [BR:
osa04040
]
Chloride channels
Chloride channel (CLC)
107279829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
DUF5559
Motif
Other DBs
NCBI-GeneID:
107279829
NCBI-ProteinID:
XP_015620848
LinkDB
All DBs
Position
4:complement(join(22465565..22465654,22465791..22466922,22467018..22467287,22468109..22468371,22469628..22469805,22469975..22470175,22470847..22471112))
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AA seq
799 aa
AA seq
DB search
MDGHPSPRSHHQPPPPERDGSFNYDIESMDGGGGAWRGRYESSEVLLRYDDEAGGGPRQP
LLRKRTMNTTSQIAIVGANVCPIESLDYEIVENDLFKQDWRSRKKKQIFQYIVLKWALVL
LIGMLTGIVGFFNNLAVENIAGLKLLLTSDLMLKQRYFTAFLAYGGCNLVLATTAAAICA
YIAPAAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSILGVSAGFVLGKEGPMVHTGA
CIANLLGQGGSRKYHLTWNWLRYFKNDRDRRDLITCGSAAGVAAAFRAPVGGVLFALEEA
ASWWRSALLWRTFFTTAVVAVVLRGLIEFCRSGKCGLFGQGGLIMFDLSSTIPTYTAQDV
VAIIVLGIIGGVFGGLFNFLLDRILRAYSIINERGPPFKILLTMIISIITSACSYGLPWL
APCTPCPADAAEECPTIGRSGNFKNFQCPPGHYNGLASLFFNTNDDAIRNLFSSGTEKEF
HMSTLFVFFTAIYCLGLVTYGIAVPSGLFIPVILAGATYGRIVGTLLGPISDLDPGLFAL
LGAASFLGGTMRMTVSVCVILLELTNDLHMLPLVMLVLLISKTIADSFNKGVYDQIVVMK
GLPFMEAHAEPFMRNLVAGDVVSGPLITFSGVEKVGNIVHALRITGHNGFPVVDEPPVSE
APELVGLVLRSHLLVLLKGRSFMKEKVKTSGSFVLRRFGAFDFAKPGSGKGLKIEDLDLT
DEELDMYVDLHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRPPIVGILTR
HDFMHEHIHGLFPNLGKSH
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggacggccacccctcgccgcgttcacaccaccagccccctccgccagagcgggacggc
agcttcaactacgacatagagagcatggacggcggcggcggcgcgtggcgagggcggtac
gagtcgtcggaggtgctgctgcggtacgacgacgaggccggcggcggcccgcgccagccg
ctgctgcggaagcgcaccatgaacaccacctctcagatcgccatcgtcggcgccaacgtc
tgccccatcgagagcctcgactacgaaattgtggaaaatgaccttttcaagcaagactgg
cgatcgagaaagaagaagcagatatttcagtatattgttcttaaatgggccttagttctg
cttattggcatgttgactggaattgttggcttctttaacaatcttgcagtcgaaaatatt
gcaggattaaaactattgctcacaagtgatctcatgctcaagcagaggtacttcacagca
tttttggcatatggtggttgtaatctagtcctggcaactactgctgcagcaatctgtgct
tacatagcaccagctgctgctggatctggtattcctgaagttaaagcatatcttaatggg
gttgatgcttattctatattagctcccagtacactatttgtgaagatatttggttcaata
cttggagtttcagctggatttgtacttggaaaggaaggacccatggtacatacaggagca
tgcatagccaacttgcttggtcaggggggttcacgcaaataccatcttacatggaattgg
ctgagatattttaagaacgacagggataggcgagatttgattacttgtggatcagcagct
ggagttgcagcagcatttcgtgcaccagttggtggtgtgctctttgctcttgaggaagca
gcatcatggtggcgaagtgctcttctatggagaacattctttacaactgctgttgttgct
gttgtgttgaggggccttatcgagttctgtcgtagtggaaaatgcggtctctttgggcaa
ggagggttgattatgtttgatctaagttcaaccatcccgacatacactgcccaagatgtt
gtggcaataatagtccttggaataattggcggtgtttttggaggccttttcaattttctc
ttggataggattctccgtgcctacagtattattaatgagagaggccctccattcaagatc
cttctcaccatgataatatcaatcatcacctcagcatgctcctatgggctcccatggctt
gctccttgcacgccgtgccctgctgatgctgcggaggaatgccccaccattggccggtcc
ggaaactttaagaactttcagtgcccaccgggccattacaacggcctcgcgtcgctcttc
ttcaacacaaacgatgatgccatccgcaacctgttcagcagtggcaccgagaaggagttc
catatgtccaccctgttcgtcttcttcaccgccatctactgccttggcctcgtcacctac
ggtatcgccgttccatctggtctcttcatccctgtgatacttgctggggctacgtacggg
cgcatagttgggacacttctgggtcccatatctgatcttgacccaggcctcttcgcactg
ctcggtgcggcttctttccttggtgggacaatgaggatgacggtatcagtctgcgtgatc
cttctggagctcacaaatgacctccacatgctccctttggtcatgctcgtccttctgata
tccaagaccatagccgatagcttcaacaagggggtctatgatcagattgtggtgatgaaa
ggcttgccattcatggaggcacatgccgagccgttcatgaggaacctggttgccggtgac
gtcgtgtctgggccactcatcaccttctccggggtcgagaaggtggggaacatcgttcac
gcgctgaggatcacgggccacaatgggttcccagtggtcgacgagccacctgtatcagaa
gccccagagctggttgggttggtgcttcggtcccatctgctggttctgctgaaaggcagg
tccttcatgaaggagaaggtgaaaaccagcggtagcttcgtgctgcgaaggtttggtgcc
ttcgacttcgccaagccaggctctgggaaaggcctcaagatcgaagacctggatctcacc
gatgaggagctggacatgtatgttgatctccatccgattacaaacacctcaccctacacg
gtggtcgaaacaatgtcacttgcaaaggctgcagtgctcttcagggcactaggattaagg
cacctactggtcgtgccaaagaccccaggaaggccccctatagttggaattctcacaagg
cacgatttcatgcatgagcatattcatgggctgttcccaaatctcggcaagtcacactaa
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