KEGG   Oryza sativa japonica (Japanese rice): 107281645
Entry
107281645         CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107281645
   04120 Ubiquitin mediated proteolysis
    107281645
  09126 Chromosome
   03083 Polycomb repressive complex
    107281645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    107281645
   04121 Ubiquitin system [BR:osa04121]
    107281645
   03036 Chromosome and associated proteins [BR:osa03036]
    107281645
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107281645
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107281645
   Cul7 complex
     107281645
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107281645
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107281645
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 107281645
NCBI-ProteinID: XP_015646059
LinkDB
Position
7:26144826..26145353
AA seq 175 aa
MAAAAAAAAEEEEEKESGSSRMITLKSNDEKLVEVTEASARQSRAIANLIDDGCADVIPL
PNVDSKTLAKVIPYCDEHGRANSGTDEERAALGRFDADFVGELDKDKASLIDVIMAANYL
NIQGLLDITCQRVADTIGSATAEKIREAFDIEDDLTEAEKKEIREENAWAFDGIP
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggccgcggcggcggccgcggcggaggaggaggaggagaaggagagcggcagcagc
aggatgatcaccctgaagagcaacgacgagaagctggtcgaggtgacggaggcgtcggcg
aggcaatccagggccatcgcgaacttgatcgacgacggctgcgccgatgtcatcccgctc
cccaacgtcgactccaagaccctcgcgaaggtgatcccgtactgcgacgagcacggcagg
gcgaactccggcaccgacgaggagagggcggcgctggggaggtttgacgcggacttcgtc
ggcgagctggacaaggacaaggcgtccctcatcgacgtcatcatggccgccaactacctc
aacatccaggggctcctcgacatcacctgccagcgcgtcgccgacacgatcgggagcgcc
accgccgagaagatccgcgaggcgttcgacatcgaggacgacctcaccgaggcggagaag
aaggagatccgcgaggagaacgcctgggccttcgacggcatcccgtaa

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