Oryza sativa japonica (Japanese rice): 112937424
Help
Entry
112937424 CDS
T01015
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112937424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
112937424
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112937424
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112937424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
zf-RING_14
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
112937424
NCBI-ProteinID:
XP_025877858
LinkDB
All DBs
Position
12:join(592575..592673,592767..593129)
Genome browser
AA seq
153 aa
AA seq
DB search
MAARRRSSIATINMEALDCAICYNPLEPPVFFHCGVGHVICSSCHGKLADRSSYHVCNIV
SGYNRCIAVDHILYAITVPCPNAAHGCAVRMTYHDVDEHAGRCPHAPCFCPEPVCGFAAG
GPAALLAHFTGMHGWPVTGMRRNSTFGVEVREG
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaggcggagaagctccatcgccaccattaatatggaagctctggactgcgcc
atctgctacaaccctctcgaacccccagtcttcttccattgtggagttgggcatgtcatc
tgttcatcctgccatggcaagctcgccgacaggagcagctaccacgtctgcaacatcgtc
tccggctacaaccgctgcatcgccgtcgaccacatcctgtacgccatcacggtgccctgc
cccaacgccgcccacggctgcgccgtcaggatgacctaccacgacgtcgacgagcacgcc
ggcaggtgcccgcacgcgccgtgcttctgcccggagccagtctgcggcttcgccgccggc
ggccccgccgcgctgctcgcccacttcaccggtatgcacggctggccggtcaccgggatg
aggcgcaacagcacgttcggcgtcgaggtgcgggaagggtag
DBGET
integrated database retrieval system
