Oryza sativa japonica (Japanese rice): 112937615
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Entry
112937615 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112937615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
112937615
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112937615
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112937615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112937615
NCBI-ProteinID:
XP_025878219
LinkDB
All DBs
Position
1:join(1248175..1248540,1248846..1249583)
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AA seq
367 aa
AA seq
DB search
MTQQLTFGEMISSDRSQKHLSATQEKGGQLPRPLEWSGDMVEQNKRARANGEVKQEQQQE
EEEEVEEGEVSQEETQRTGAFPLVTMAAMEQTEEETQIDVRIAVALLHCHACLQPLKPPV
FKCDEAHIVCSGCRCGHHGQLCGGAAVYSHCAELDAIVATAKVPCAHAPYGCSSYVVYAG
VADHQRACPCAPCSCPEPGCRFRSSPAALPGHLAAGHSWPVAEIAYGKPRKLAVPPPAHV
LVGEADRAVFLVSSCAVGAGAAVCVVCVRANGGGDNAAAVARYKCKLWVEVPSNDDNMAM
MTSMVRSSDLAGGFPAADKGMLLWVPPEMLHGVPGGEAAILSIRIDRAAAATPKFTTTRA
RSQKGMH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacagctcacttttggtgaaatgatcagtagtgaccgaagccaaaagcatcta
tctgcgacccaagaaaaaggtggtcagctaccccgtccattggagtggagtggagatatg
gtggagcagaacaagagggcgagggccaatggcgaggtcaagcaggagcagcagcaagag
gaagaagaagaggttgaggaaggagaagtgagccaagaagaaacccaaaggacgggagct
ttccctctggtgaccatggccgccatggagcagacggaggaggagacgcagatcgacgtc
aggatcgccgtcgccttgctccactgccatgcttgcctccaacctctcaagcctcccgtc
ttcaagtgcgatgaggcgcatatcgtgtgctccggctgccgctgcggccaccatgggcag
ctgtgcggtggcgccgccgtgtacagccactgcgccgagctggacgccatcgtcgccact
gccaaggtgccgtgcgcccacgcgccgtacggctgcagcagctacgtcgtgtacgcgggc
gtcgccgaccaccagcgcgcgtgcccgtgcgcgccatgctcctgcccggagcccggctgc
cgcttccgcagctcgccagcggcgctccccggccacctcgccgccggccactcctggccc
gtcgccgagatcgcctacgggaagccgcgcaagctcgccgtgccgccgcccgcccacgtc
ctcgtcggggaggccgaccgcgccgtgttcctcgtgtcgtcgtgcgccgtcggcgcgggc
gccgcggtgtgcgtggtctgcgtcagggcgaacggcggcggcgacaacgcggcggcggtg
gcgcggtacaagtgcaagttgtgggtggaggtgcctagcaacgacgacaacatggccatg
atgacgtcgatggtgaggagcagcgacctcgccggcgggttcccggcggcggacaagggg
atgctgctgtgggtgccgccggagatgctgcacggcgtgcccggcggcgaggcggccatc
ctcagcatccgcattgatagagctgctgctgccacgcccaagttcacgactacacgagcc
aggtcccagaagggaatgcactga
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