Oryza sativa japonica (Japanese rice): 112937619
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Entry
112937619 CDS
T01015
Name
(RefSeq) disease resistance protein RPP13
KO
K15559
regulator of Ty1 transposition protein 103
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
112937619
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112937619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
AAA_16
LRR_At5g56370
AAA_22
Motif
Other DBs
NCBI-GeneID:
112937619
NCBI-ProteinID:
XP_025878225
LinkDB
All DBs
Position
1:complement(join(41199849..41202210,41204513..41205021))
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AA seq
956 aa
AA seq
DB search
MAETAITTVLAKVAELVAWEAAVLLEVGDDVRLLRDKLEWLHTFIRDADRRRRRRDDEFV
AVWVRQTRDVAFEAEDALDDFLHRAARRHRQATPLAAMLLPSCAAAAAAWPPRCAGQVAL
RHGLSGRIRQIRKRLDEISANRAAYNIEHTPSPAWATHPSSAAATALAAWDDFEEYTVGF
DKYSNMLKEQLIDDAVTGRAIVSIVGESSIGKTTLGRKVYQSPEVRNHFEIRTWTVLPPK
CRPADVLRDIYRQASSQLRRSPSQQSADDGCGADAAVAACRSSGKDVGNLLFRNLTGRRY
IVVVDGSIAASDWNSLRASLPDEGNGSRVVLITDMAGLEVVTYAAGPTMNSPIKLERLSP
ENTYEVFRRRVFGRGGDCPRQHRSRYYQKIFQITRGLPLSIVVLAGVLRSKEPPAEWDEV
MSQLATAREPSSSSSKNGNSGRIMSLAFDDLPHHLKSCFLYFAAMRESATVDAQRLVRLW
VAEGFVRPRRGSTMEEVGQGYLKELISRCMVQLVDKDEFGVVQTVVVHDRLHAFAQDEAQ
EASFIESHDSTDVLAPATVRRLAVQNSSERYVHLSNALPKLRSVVCDLVDGRNGGGGGGK
CIHCTDLGFLHASKFLRVIDIHGLELKKLPNEIGSMIHIRYLGLQCGQLEKLPPSVSNLV
NLQSLILKGRNAGHVLDVTAAFWRITTLRHVVAPFALPKVLGDLHSLQTLHGVQHLCWDT
RGGGGGGGNPLGTSTNLRSLELSGLLAKHAAALTAALESLDLLVHLMLDGESLPSTVFTI
PSLRRLQSLKLRGSMDSPEGPGGDDDDDNESADDGVVRYIRPNLTRLSMWSTMVGQKFVD
MLGELPSLAELTLMVAAFDGERLEFRDGGFRSLQKLKLGLPELEEWTVKAGAMASLARLT
LFGCLKMRMLPEALAGIPELEEVVLYRMPIMVERIKKHGGEDHHKVKHVPVIQTIW
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacggcgatcacgacggtgctggcgaaggtggcggagctggtggcgtgggag
gcggcggtgctgcttgaggtcggggacgacgtccgcctcctccgcgacaagctggagtgg
ctccacaccttcatccgcgacgccgaccgccgccgccgccgccgcgacgacgagttcgtc
gccgtctgggtgcgccagacccgcgacgtcgccttcgaggccgaggacgcgctcgacgac
ttcctccaccgcgccgcccggaggcaccgccaggccaccccgctagcggcgatgctgctg
ccttcctgtgccgccgccgccgccgcgtggcccccgcgctgcgccggccaggtcgcgctc
cgccacggcctctccggccgcatccgccagatcaggaagcgcctcgacgagatctccgcc
aaccgcgccgcctacaacatcgagcacacgccgtcccccgcctgggctacccacccctcc
tccgccgccgccaccgccctcgccgcctgggatgatttcgaagagtatactgtcggcttc
gacaagtacagcaacatgctcaaggagcagctcatcgacgacgccgtcaccggccgcgcc
atcgtctccatcgtcggcgagagcagcatcggcaagacgacgctcggccgcaaggtgtac
cagagccccgaggttcgcaaccacttcgagatacgcacgtggacggtgctcccgcccaag
tgccgcccggccgacgtcctccgtgacatctacaggcaggccagctcccagctccggcga
tctccgtcccagcagagcgcggacgacggttgcggcgccgacgccgctgtggcggcgtgc
cggtcgtcggggaaggacgtcggtaacctgctgttccggaacctgaccggccggcgttac
atcgtcgtcgtcgacggcagcatcgcggcctccgactggaacagcctgagagcgtcgctc
cccgacgagggcaacggcagcagggtggtgctgatcaccgacatggccgggctggaggtg
gtcacgtacgccgccgggccgacgatgaacagcccgatcaagctggaacggctcagcccg
gagaacacgtacgaggtgttccggcgccgggtgttcggccgcggcggcgactgcccgcgc
cagcacaggtcgaggtactaccagaagatcttccagatcacccgcggcctgccgctgtcg
attgtcgtcctcgccggcgtgctgcggtccaaggagcccccggcggagtgggacgaggtg
atgtcgcagcttgccacggcgagggagccgtcgtcgtcgtcgtccaagaacggcaacagc
gggcggatcatgtcgctggcgttcgacgacctgccgcaccacctcaagtcgtgcttcctc
tacttcgcggcgatgcgggagagcgccaccgtggacgcgcagcggctggtgcggctgtgg
gtggccgaagggttcgtgcggccgcggcgggggagcaccatggaggaggtcgggcagggc
tacctcaaggagctcatctcccggtgcatggtgcagctggtggacaaggacgagttcggc
gtcgtgcagacggtggtggtgcacgaccgcctccacgccttcgcgcaggacgaggcgcag
gaggccagcttcatcgagagccacgacagcaccgacgtgctcgcgccggccaccgtgcgc
cgcctcgccgtccagaactcctccgagagatacgtccacctcagcaatgctctccccaag
ctccgctccgtcgtctgcgacctcgtcgacggtcgcaacggcggcggcggcggcggcaag
tgcatccactgcaccgaccttggcttcctccacgcgtccaagttcctccgtgtcattgac
atccatggcctcgagctcaagaagcttccaaacgaaatcggctcgatgatccacatcagg
tacctgggtctccagtgcggccagctggagaagctgccgccgagcgtgagcaacctcgtc
aacctgcagtcgctgatcctgaagggcaggaacgccggccacgtgctcgacgtgaccgcc
gcgttctggaggatcaccacgctgcggcacgtcgtggcgccgttcgcgctgcccaaggtg
ctcggtgacctgcacagcctccagacgcttcacggcgtgcagcatctgtgctgggacacg
cgcggcggcggcggcggcggcggcaacccgctggggacgtccaccaacctccggtcgctg
gagctcagcgggctgctcgccaagcacgccgccgctctgacggcggcgctggagagcctg
gacctgctggtgcacctgatgctggacggcgagtcgctgccgtcgaccgtgttcaccatc
ccgagcctacggcggctgcagagcctcaagctacggggctccatggactcgccggagggg
ccgggcggcgacgacgacgacgacaacgagtcggcggacgacggcgtggtgcggtacatc
cggccgaacctgacacggctgtcgatgtggagcacgatggtggggcagaagttcgtggac
atgctgggggagctcccgagcttggcggagctgacgctgatggtggcggcgttcgacggc
gagcggctggagttccgggacggcgggttccggagcctgcagaagctgaagctgggcctg
ccggaactggaggagtggacggtgaaggccggggccatggcgtcgctggcgaggctgacg
ctgttcgggtgcctcaagatgcggatgctgccggaggcgctcgccgggataccggagctg
gaggaggtggtgctgtacagaatgccgatcatggtggagaggatcaagaagcacggcggg
gaggatcaccacaaggtcaagcacgtccccgtcatccagaccatctggtag
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