Oryza sativa japonica (Japanese rice): 112937638
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Entry
112937638 CDS
T01015
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00040
Pentose and glucuronate interconversions
osa01100
Metabolic pathways
Module
osa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112937638
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112937638
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Cytomega_UL20A
Motif
Other DBs
NCBI-GeneID:
112937638
NCBI-ProteinID:
XP_066168698
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All DBs
Position
1:join(3748219..3748459,3748580..3748661,3748767..3748872,3749029..3749142,3749242..3749469)
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AA seq
256 aa
AA seq
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MITHACIYVYQILAFAACNNLSVTNIHLTNSADKHMTVYRCSQVHVHNVTIVAPGDSPNT
DGITMAISDHVYISNCSIQSGDDCVSMLSYTTDVNITDITCGPGHGISVGSLGRFETALV
ERITVSNCNFIGTKNGVRIKSWQGGMGQATGFIFENINMTAVESPIIIDQFYCPQGNCPL
KDGGVAISDARFINIRGTSSEQEAIKILCSQSVHCQGIYLSNINLSWENHTALANATILN
ANGTVEGSVVPKVVFS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgattactcatgcatgtatctatgtgtatcagatcctggcctttgctgcgtgtaacaat
ctatcggtgacgaatatacatctgacgaacagcgcagacaaacacatgactgtgtacagg
tgcagccaggtacatgtgcacaatgtcaccatagttgcaccaggcgacagccccaataca
gacggcataaccatggcaatttctgatcatgtgtacatctcaaattgctctatccaaagt
ggagacgactgcgtgtcgatgctatcatacaccactgatgttaacatcactgacatcaca
tgtgggcctggccacggcatcagcgtgggaagccttggacgattcgaaacggcactggtg
gaacgaattacagtatccaactgtaactttattggaacaaagaatggtgtgaggatcaaa
tcatggcagggtggaatgggtcaagcaacggggttcatttttgaaaacatcaacatgact
gcagtcgaaagtcccattatcatcgaccagttctattgtccccaaggaaactgtccatta
aaggatggtggtgtggccataagtgacgcaagatttatcaatatccgtgggacatcctcc
gagcaagaggccatcaagatattgtgcagtcaaagtgtgcattgccaaggcatctacctc
agtaatattaacctctcatgggaaaatcataccgccctagcaaacgccactattttaaat
gcaaacggaactgttgagggatcagtggtaccaaaagttgttttttcataa
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