KEGG   Oryza sativa japonica (Japanese rice): 136351125
Entry
136351125         CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    136351125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:osa03400]
    136351125
Enzymes [BR:osa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     136351125
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     136351125
   FA (Fanconi anemia) pathway
    Downstream FA components
     136351125
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 HBB
Other DBs
NCBI-GeneID: 136351125
NCBI-ProteinID: XP_066160187
LinkDB
Position
9:complement(join(26305049..26305090,26305271..26305393,26305491..26305544,26305626..26306547,26306629..26307038,26307110..26307234,26307350..26307397,26307494..26307615,26307693..26307721,26307881..26307925,26308068..26308255,26308366..26308522,26308606..26308689,26308820..26308913,26309219..26309336,26309664..26309756,26309828..26309900,26310035..26310122,26310500..26310570,26310665..26310744,26310830..26310891,26310995..26311136,26311236..26311336,26311426..26311470,26311551..26311615,26311914..26311989,26312072..26312126,26312242..26312599))
AA seq 1289 aa
MGAATADEDFATPPPPARAPGGRVYQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQG
RSHALLESPTGTGKSLSLLCSALAWQRHYPLRAPPAAAPDPFLHGGGFVPDDTQKQATPG
VPEKATRKKNVPTIYYATRTHAQITQVVREYRKTSYRVRMAILASRKHYCVNKNVCMSGN
IDELCKSLLDDSAQGCPEYKNAQKLSRHPSLQIGGCYEVHDIEDLVRVGRKVKGCPYFAA
QTMAEAAQLVFCPYNYLISPIVRRAMDIDIRGSIIVLDEAHNIEDIARDAGSFDVDEESL
LFLRQELEGLVTDEAVAKIYEPLHEVIQGLNGWIDEQGNNLQKNEFEHPASFWTGEEAMK
ELKYAGITPVNFPVLQECATKAIKAASDAESEGVHLSGGSAMTLESLFSSLSYFFAENGR
HSNDYQLALQRFAKREGNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTLSVILTSGTLSP
MGSFASELGVQFEACMEAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQDELGA
TLEEICRVVPGGALVFFPSYNLLEKLQRRWSQTGQWARLEAQKHVCVEPRGSTEELEPVL
KGYYNAILGKAPPKKGRGGAKQIVKNRVTKDSSQESAKGGAAFLAVCRGKVSEGIDFSDD
KARVVVIVGIPFPNINDVQVKLKKRYNDSYKSSKDLLSGNEWYCHQAFRALNQAAGRCIR
HKFDYGGIILIDERYQEERNIVYISKWLRNSIRNCGTFQETMDGLTRFFQNAEEQIKIKA
QGVSPKDRLDACVLPSQGDKRKLPWPEPNFSNQTVLQNNKDVKSESHIDGAGVDRMKLSD
TSSESWHLSSKHSGLVKKQISPEPENVPMACQLPPSYKVQYNLEGEADNGTNYEVNINFI
DLEECDTKPRYVKLTIFNPSEHITQQSTVMEETYAEVPIASPSNRNGENASTVMNEGDPV
LDLPISLSAANRNISCVSTSAATPERSGSISHLEHESWTNRSVNSHCQKRRKLSSPMSCC
TYTERSCSPSKPYLHGGCDVSMLPGDLRTDGMCCKSMKMSRCENVKVERNSKLAEFPSRE
STQEKLFICCARCKTALGLQEDGFLVSCSSSLSSKFYLTYLWRHGPSADILPGKDFLASP
PLKIKVMVCNVSSVNKMMLGNLSNEGSAHNSSFWSEKDGCVYKPVTCQTCSCKNACVTTL
GAQVVATDSSNQQFCDKVILFDDLLHVKHGPSKDQALSAPIGTVKPISPPPVIDLESFAY
KPLKKDPVPVNTRRSKLRLPGTAKSRNGA
NT seq 3870 nt   +upstreamnt  +downstreamnt
atgggcgccgccacggcggacgaagacttcgccaccccgccgccgccggcgcgggcgccc
ggcggcagggtgtaccaggtgggcggcgtgccggtggagttcccgtacaagccgtacggg
acgcagctcgccttcatgggccgcgtcatcgccacgctggaccgcgcgcggcggcagggc
cgctcccacgcgctcctcgagtcgcccaccggcaccggcaagtcgctctccctcctctgc
tccgcgctcgcctggcagcgccactacccgctgcgtgccccgcccgccgccgcccccgac
ccgttcctccacggcggcggcttcgtccccgacgacacccagaagcaggcgacgcccggc
gtcccggagaaggcgaccaggaagaagaatgttccgaccatctactatgcgacgaggacg
cacgcgcagataacccaggtggtccgggagtaccgcaagacgtcataccgagttcgcatg
gccatcttggcctcaaggaagcactactgtgtcaataagaatgtgtgcatgagtggcaac
atcgatgaactatgcaagtcactccttgatgacagtgctcaaggctgtccagaatacaag
aatgcacagaaactaagtcgccatccatcccttcagattggtggctgctatgaagttcat
gatattgaggatctcgttagagttggacggaaagtgaaggggtgcccatattttgctgca
caaactatggctgaggcagctcaactggttttctgcccatataactatctgattagtcca
atcgtgaggagagcaatggacattgacataagaggctcaatcattgttcttgatgaggct
cacaacatagaagacatagcacgtgatgctggaagttttgatgttgatgaagaatcactt
ctctttttgcggcaagaactagaagggttagtcactgatgaggctgttgcaaagatatac
gaacccttgcatgaagttattcaggggcttaatggttggattgatgagcagggaaataac
cttcaaaagaatgagtttgagcatcctgcttcattttggactggtgaagaggctatgaag
gaactcaagtatgctggcattactcctgtaaacttcccagtattgcaagagtgtgcaaca
aaggctattaaagctgcttcagatgctgaatcagaaggagtgcacttaagtggtggttca
gctatgacactagagagtttgttctcctcattgagctacttttttgctgagaatggacgc
cattcaaatgattaccaacttgctttacagcgttttgctaaacgtgaaggcaattctgtc
acttctttcattggatggaagtgtgtgatgagtctgtggtgtctcaatcctgctgttgtt
tttcgagacatcgcagatctaacactttcagtaattctcacatctggcacactctctcca
atgggatcctttgcatctgaacttggtgtccagtttgaagcttgcatggaagctcctcat
gtaatcaatgctgattctcaggtttttgcaactgtgctatcatctggcccaacaggacgt
cgactgaatgccagttatagaactgcaaatgaatattctttccaggatgaacttggagct
acactagaagaaatatgcagagtagtgcctggtggtgctcttgtgttttttcctagctac
aatttgttggagaaacttcaaaggcgctggtctcagacaggtcaatgggcacgattggag
gctcaaaagcatgtatgcgttgagcctagaggaagtaccgaggaacttgagcctgtccta
aaaggatattacaacgcaatccttggcaaggctcccccaaagaaaggcagaggtggtgca
aaacaaattgtgaaaaatcgagtgacaaaggattcatcacaggagtctgctaaaggaggt
gctgcttttcttgcagtttgtcgtggaaaggtatctgaggggattgacttctctgatgac
aaagctagagttgtggttattgttggcattccatttccaaatataaatgacgttcaagta
aagctcaaaaagagatataatgattcatacaaatcatcaaaagatttgttgagtgggaat
gaatggtactgccatcaagcatttcgtgctctgaatcaagctgcaggtcgatgcattcgc
cataaatttgattatggagggataattttgattgatgagcgttatcaggaagaaagaaat
attgtgtatatttctaaatggcttaggaattcaattaggaattgtggtactttccaggag
acaatggatggattgacaaggttttttcaaaatgctgaggaacaaataaaaatcaaagct
caaggtgtgtcccctaaggacagattggatgcttgtgtactcccatctcaaggcgataaa
agaaagctgccatggccagaaccaaatttctcaaaccagacagtactgcaaaataataag
gatgttaagagtgaaagccacattgatggtgcaggagttgaccgtatgaagttgtctgat
acatcatcagagtcatggcatctctcttcaaaacattctggtttagtaaagaaacaaatc
tccccagaaccagaaaatgtgccaatggcatgccaactccctccctcatacaaagttcaa
tataatttagaaggtgaagcagataatgggacaaattatgaagtaaatataaacttcatt
gacttggaagagtgtgatactaagccacggtatgtgaagttaactatctttaatccttca
gaacacataacacaacaatctactgttatggaagaaacttatgcagaggtgccaattgct
agtcccagtaaccgaaatggggaaaacgcctctacagtgatgaatgaaggagatccggtt
ttagatctgcccatttcgctttcagctgctaacagaaacatttcttgtgtgtccacatcg
gcagctactcctgaaagatcaggtagcattagtcatttggagcatgaatcttggactaac
agaagtgtgaattcccactgccagaaaaggagaaagttaagctcccctatgagctgctgt
acctacacagagcgttcatgttctccaagcaaaccctacttacatggtggttgtgatgta
agcatgttgcctggagatctgagaactgatggaatgtgttgcaagagtatgaaaatgtca
agatgtgaaaatgttaaggttgaaagaaacagcaagcttgcagagttcccatcgagggaa
tctacgcaggagaagcttttcatttgttgcgctagatgcaaaacagcacttggattacaa
gaggatggctttcttgtttcatgctcatcgtctttgtcctcaaaattttacttgacatat
ctttggagacatggaccatcagcagatatccttccaggaaaagattttttggcatcacca
cccttgaagataaaagtgatggtgtgcaatgtatcttcagtgaacaagatgatgcttggc
aacttgagcaatgaaggttctgctcataattctagtttttggtctgaaaaggatggatgt
gtgtacaagccagtaacttgtcagacttgctcttgcaaaaacgcctgtgtcacaaccctc
ggagcacaagttgttgcaactgattcgtcaaatcaacaattttgtgataaggtaattttg
tttgatgatcttctgcatgtcaagcatggaccgtcgaaggatcaggctttaagtgctccc
ataggtactgttaaacccatctcacccccgccagtgattgatctcgagtcctttgcgtac
aaaccactgaagaaggatcctgtgccggtgaacacaagaaggtccaagcttaggttacct
ggcacagccaaatccaggaatggtgcataa

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