KEGG   Oryza sativa japonica (Japanese rice): 136356281
Entry
136356281         CDS       T01015                                 
Name
(RefSeq) GTP-binding protein YPTM1 isoform X1
  KO
K07874  Ras-related protein Rab-1A
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    136356281
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    136356281
   04031 GTP-binding proteins [BR:osa04031]
    136356281
Membrane trafficking [BR:osa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    136356281
 Autophagy
  Other autophagy associated proteins
    136356281
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   136356281
  Exosomal proteins of other body fluids (saliva and urine)
   136356281
  Exosomal proteins of colorectal cancer cells
   136356281
GTP-binding proteins [BR:osa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    136356281
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB MMR_HSR1 Nairovirus_NSm
Other DBs
NCBI-GeneID: 136356281
NCBI-ProteinID: XP_066166105
LinkDB
Position
4:join(22548395..22548408,22548539..22548611,22548741..22548788,22548915..22548962,22550491..22550562,22550655..22550810,22550908..22551011,22551092..22551206)
AA seq 209 aa
MNNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKEWMSEIDKYANDSVCKLLVG
NKCDLAESRVVETAVAQAYADEIGIPFLETSAKDSINVEEAFLAMCAAIKKQKSGSQAAL
ERKASNLVQMKGQPIQQQQQPQKSSCCSS
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaacaacgaatttgattacctgttcaagctgctcctcatcggcgactcctcggtcggc
aagtcatgcttcctcctccgattcgcggacgactcctacgtcgacagctacatcagcacg
atcggtgttgacttcaagattcgcacgatcgagatggacgggaagaccatcaagctgcag
atctgggacacagcaggacaggagcgattcagaaccatcaccagtagctactaccgggga
gctcatgggataattatcgtctatgacattacggatatggagagcttcaacaatgtgaag
gagtggatgagcgagatcgacaagtacgccaatgacagcgtatgcaagcttcttgttggt
aacaagtgtgatctggcagagagcagagttgttgaaactgcagtagcacaggcttatgct
gatgagataggcattccattccttgaaacaagtgctaaggactcgatcaatgtcgaagag
gctttcttggctatgtgtgccgcaatcaaaaagcaaaaatctgggagccaggcagccctg
gagaggaaggcatccaatctagttcagatgaaaggtcagccaattcagcaacagcagcag
ccacagaagagcagctgttgttcatcgtga

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