Oryza sativa japonica (Japanese rice): 136356525
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Entry
136356525 CDS
T01015
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136356525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
136356525
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136356525
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136356525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_5
zf-C3HC4_3
NOA36
Motif
Other DBs
NCBI-GeneID:
136356525
NCBI-ProteinID:
XP_066166638
LinkDB
All DBs
Position
5:3053884..3055038
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AA seq
384 aa
AA seq
DB search
MRLARILPMAASSSSSKRRAMGMAASDQGDTSAHAMKKPRVRVAPDSSASEDDTDEDHGH
DEGDGGEEEEEEEEPDGDGEEESQSYQDPLESDGDGVDEEASAGDMAASEPAAPSTRAAV
AGVTVEDADALECGVCFLLLRPPIFQCEVGHVVCAPCRDTLAPAGRCYVCRVAVAGGEYR
RCYALERLVDAIRVACPHAAHGCAARPAYHDVEAHRLACPHGPCHCPGERCGFVGSTAAL
LDHFAATHNWPCTTNVRAREVFDVRLHDGFNFLVVGGASRHHLVMMNMTREPLGRAITVL
RIHPHATGRIQCELSLSRHVVLGDSWGLYRSHYQKSVFDVGCSDLADGLPDAKQCFQFVV
PRCVAGDDDEGGTGIRINVLITVD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgcgaggattctgcccatggcggcctcctcttccagctcgaagcggcgagcc
atgggcatggcggcgtcggaccaaggtgacacctccgcccacgccatgaagaagcctcgc
gtccgtgtcgcgccggattcctcagcttcggaggatgacaccgacgaggaccatggccat
gacgaaggcgacggcggcgaggaggaggaggaagaagaagaacctgacggtgatggcgag
gaggagagccagagttatcaagatcctttggagtctgatggcgatggtgtggacgaagag
gcaagcgccggcgacatggctgcctccgagccggcggcgccgtcgacacgcgcggcggtg
gcgggcgtgacggtggaggacgccgacgcgctcgagtgcggcgtgtgcttcctcctgctg
aggccgcccatcttccagtgcgaggtgggccacgtcgtgtgcgcgccgtgccgcgacacg
ctggcgccggcgggcaggtgctacgtctgccgcgtcgccgtcgccggcggcgagtaccgg
cgctgctacgcgctggagcgcctggtggacgccatccgcgtcgcgtgcccgcacgccgcc
cacggctgcgccgccaggccggcctaccacgacgtcgaggcgcaccgcctcgcgtgcccg
cacgggccttgccactgccccggcgagcgctgcggcttcgtcggctcgaccgccgcgctc
ctcgaccacttcgccgccacgcacaactggccgtgcaccaccaacgtcagggcccgcgag
gtgttcgacgtccgcctccacgacggcttcaacttcctcgtcgtcggcggcgcctcgcgc
caccacctggtcatgatgaacatgacgcgggagccgctcggccgcgccatcaccgtgctc
cgcatacacccgcacgccacgggcagaatccagtgcgagctctcgctctcgcgccatgtc
gtccttggcgacagctggggcctctatcgcagccactaccagaagtccgtgttcgacgta
ggttgcagcgacctcgccgatggattgccggatgcaaagcagtgcttccagttcgtcgtg
ccaagatgcgtcgccggagacgacgacgaaggtggcaccggcatccgaatcaatgtccta
attaccgtcgactag
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