Oryza sativa japonica (Japanese rice): 136356526
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Entry
136356526 CDS
T01015
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136356526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
136356526
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136356526
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136356526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
136356526
NCBI-ProteinID:
XP_066166639
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All DBs
Position
5:3057262..3058218
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AA seq
318 aa
AA seq
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MPPPPPPPPPPPPPPPPRPFSRKPSEPAAPSTRAVVAVTGVTVEDADALECGVCFLPLRP
PIFQCEVGHVVCSPCRDKLAPAGRCHVCRVAVAGGEYRRCYALERLVDAIRVACPHAAHG
CGATPAYHALDAHRRACPHAPCHCPGERCGFVGSTVALQDHIAATHSWPCTTNVRAGETV
SVHLRDGLAFLRVHHHRRRGSATYSDHLIMLNVTREPYGRAVSVLCIRPHAAAEHQVSPP
PPPAMQCELLLVSRFGYDGDGGHCRSHYQKSEFLIGCSDLADGLPDREQSFQFMVPRCVV
GDDDEGGIQIHVRIIVIN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgccgccgccgccaccgccaccgccaccgccaccgccaccacggccgttt
tccaggaagccctctgagccggcggcgccgtcgacacgcgccgttgtcgcggtgacgggc
gtgacggtggaggacgccgacgcgctcgagtgcggcgtgtgcttcctcccgctgaggccg
cccatcttccagtgcgaggtggggcacgtcgtgtgctcgccgtgccgcgacaagctggcg
ccggcgggcaggtgccacgtctgccgcgtcgccgtcgccggcggcgaataccggcgctgc
tacgcgctggaacgcctggtggacgccatccgcgtcgcgtgcccgcacgccgcgcacggc
tgcggcgccacgccggcgtaccacgccctcgacgcgcaccgccgcgcctgcccgcacgcg
ccgtgccactgccccggcgagcgctgcggcttcgtcggctcgaccgtcgcgctccaggac
cacatcgccgccacgcacagctggccgtgcaccaccaacgtccgcgccggcgagacggtg
agcgtccacctccgcgacggcctcgccttcctccgcgtccaccaccaccgccgccgcggc
agcgccacctactccgaccacctcatcatgctgaacgtgacgcgggagccgtacggccgc
gccgtctccgtgctctgcatacgaccccacgccgccgccgagcatcaggtgtcgccgccg
ccgccgccggcgatgcaatgcgaactcctgctcgtctcgcggttcggctacgacggcgac
gggggccattgccgcagccactaccagaagtcggagttcctcataggctgcagcgacctc
gccgacggattgcccgatcgcgagcagagcttccagttcatggtgccaaggtgcgtcgtc
ggagacgacgacgaaggtggcatccaaatccatgtccgtattatcgtcatcaactag
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